AutismKB 2.0

Annotation Detail for ID3


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Basic Information Top
Gene Symbol:ID3 ( HEIR-1,bHLHb25 )
Gene Full Name: inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
Band: 1p36.12
Quick LinksEntrez ID:3399; OMIM: 600277; Uniprot ID:ID3_HUMAN; ENSEMBL ID: ENSG00000117318; HGNC ID: 5362
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002167
  • Location:chr1 23757042-23758871
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER Fulvestrant-MCF7GSE14664 23775297 23775376 79 16465
H3ac HepG2E 23760285 23761360 1075 1951
H3ac HepG2E 23769964 23770167 203 11194
KLF4 hESGSE17917 23767079 23767447 368 8392
SRF HepG2GSE8489 23766807 23767006 199 8035
TFAP2C MCF7GSE21234 23761332 23761731 399 2660
TFAP2C MCF7GSE21234 23773353 23774083 730 14847
hScc1 BcellGSE12603 23766833 23767744 911 8417
hScc1 CdLSGSE12603 23767301 23767882 581 8720
hScc1 CdLSGSE12603 23776072 23776815 743 17572
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 23743845 23744053 208 13094
CTCF CD4SISSRdata 23743845 23744053 208 13094
CTCF JurkatGSE12889 23743728 23744081 353 13138
CTCF G2GSE9613 23743781 23744196 415 13054
CTCF G2GSE9613 23752905 23753338 433 3921
CTCF G2GSE9613 23753647 23754283 636 3078
ER Fulvestrant-MCF7GSE14664 23755936 23755969 33 1090
H3K4me2 HCT116GSE10453 23756174 23757104 930 404
H3ac HepG2E 23751080 23751612 532 5697
H3ac HepG2E 23752869 23753531 662 3843
H3ac HepG2E 23754283 23758437 4154 683
Oct1 HelaGSE14283 23755934 23755965 31 1093
Oct4 hESGSE21916 23754839 23756519 1680 1364
RARA MCF7GSE15244 23754347 23756830 2483 1454
Sox2 hESGSE18292 23743870 23744277 407 12969
TAF HelaGSE8489 23756282 23757272 990 266
TFAP2C MCF7GSE21234 23753996 23754416 420 2837
USF1 HepG2E 23754283 23755273 990 2265
USF2 HepG2E 23754167 23755432 1265 2243
hScc1 BcellGSE12603 23743781 23744660 879 12822
hScc1 BcellGSE12603 23753782 23754283 501 3010
hScc1 CdLSGSE12603 23743781 23744660 879 12822
hScc1 G2GSE9613 23743781 23744294 513 13005
p130 QuiescentGSE19898 23743842 23744056 214 13094
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 23757308 23757638 330 0
CTCF G2GSE9613 23758307 23758737 430 0
LIN9 G0GSE7516 23757597 23759048 1451 0
LIN9 SGSE7516 23758271 23758935 664 0
Pol2 GM12878GSE19551 23757103 23758968 1865 0
Rb GrowingGSE19898 23757481 23757769 288 0
Rb shRbSenescenceGSE19898 23757473 23757890 417 0
hScc1 BcellGSE12603 23758234 23758855 621 0
p130 SenescentGSE19898 23758115 23759147 1032 0
p130 shRbQuiescentGSE19898 23758383 23759342 959 0
p130 shRbSenescentGSE19898 23758084 23759112 1028 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-106b hsa-mir-106b 7 20374639
hsa-miR-106b* hsa-mir-106b 7 20374639
hsa-miR-125b hsa-mir-125b-1 11 18056640
hsa-miR-125b hsa-mir-125b-2 21 18056640
hsa-miR-155 hsa-mir-155 21 20427544
hsa-miR-155* hsa-mir-155 21 20427544
hsa-miR-219-5p hsa-mir-219-1 6 20374639
hsa-miR-219-5p hsa-mir-219-2 9 20374639
hsa-miR-23a hsa-mir-23a 19 20374639
hsa-miR-23a* hsa-mir-23a 19 20374639
hsa-miR-29b hsa-mir-29b-1 7 20374639
hsa-miR-29b hsa-mir-29b-2 1 20374639
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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