Annotation Detail for RTP2
Basic Information Top
| Gene Symbol: | RTP2 ( MGC78665 ) |
|---|---|
| Gene Full Name: | receptor (chemosensory) transporter protein 2 |
| Band: | 3q27.3 |
| Quick Links | Entrez ID:344892; OMIM: 609138; Uniprot ID:RTP2_HUMAN; ENSEMBL ID: ENSG00000198471; HGNC ID: 32486 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 58 | S-palmitoyl | HMM predict |
| 108 | Phosphoserine(CK2) | HMM predict |
| 179 | Phosphotyrosine(INSR) | HMM predict |
- RefSeq ID: NM_001004312
- Location:chr3 188898740-188903038
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| P300 | T0-glioblastoma | GSE21026 | 188902993 | 188903593 | 600 | 255 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 188893937 | 188894230 | 293 | 4657 |
| CTCF | G2 | GSE9613 | 188896042 | 188896283 | 241 | 2578 |
| TFAP2C | MCF7 | GSE21234 | 188893975 | 188894366 | 391 | 4570 |
| hScc1 | Bcell | GSE12603 | 188895871 | 188896212 | 341 | 2699 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 188898974 | 188899776 | 802 | 0 |
| FOXA1 | MCF7 | GSE15244 | 188902403 | 188902759 | 356 | 0 |
| hScc1 | Bcell | GSE12603 | 188899048 | 188899923 | 875 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19150 | EST | chr3 | 188902802 | 188934339 | 227 | mRNA | RTP2 | chr3 | 188898748 | 188903047 | Sense/Antisense (SA) pairs | |