Annotation Detail for APOC3
Basic Information Top
| Gene Symbol: | APOC3 ( APOCIII,MGC150353 ) |
|---|---|
| Gene Full Name: | apolipoprotein C-III |
| Band: | 11q23.3 |
| Quick Links | Entrez ID:345; OMIM: 107720; Uniprot ID:APOC3_HUMAN; ENSEMBL ID: ENSG00000110245; HGNC ID: 610 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 94 | O-linked (GalNAc...). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 94 | O-linked (GalNAc...)./FTId=CAR |
| Location(AA) | Modification | Resource |
|---|---|---|
| 21 | Phosphoserine(PKG) | HMM predict |
| 21 | Phosphoserine(CK2) | HMM predict |
| 48 | Phosphoserine(CK1) | HMM predict |
| 53 | Phosphoserine(IKK) | HMM predict |
| 76 | Phosphothreonine(PKC) | HMM predict |
- RefSeq ID: NM_000040
- Location:chr11 116205833-116208996
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FOXA1 | MCF7 | GSE15244 | 116204373 | 116205001 | 628 | 1147 |
| Oct1 | H2O2-Hela | GSE14283 | 116204471 | 116204505 | 34 | 1346 |
| Oct1 | Hela | GSE14283 | 116204470 | 116204505 | 35 | 1346 |
| TFAP2C | MCF7 | GSE21234 | 116205636 | 116206029 | 393 | 1 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | MCF7 | GSE19013 | 116207914 | 116209575 | 1661 | 0 |
| FOXA1 | MCF7 | GSE15244 | 116207997 | 116208797 | 800 | 0 |
| RARA | MCF7 | GSE15244 | 116207997 | 116208797 | 800 | 0 |
| RARG | MCF7 | GSE15244 | 116207997 | 116208728 | 731 | 0 |
| TFAP2C | MCF7 | GSE21234 | 116208197 | 116208787 | 590 | 0 |
| hScc1 | G2 | GSE9613 | 116207997 | 116208797 | 800 | 0 |
Validated miRNA targets