Annotation Detail for IFNG
Basic Information Top
| Gene Symbol: | IFNG ( IFG,IFI ) |
|---|---|
| Gene Full Name: | interferon, gamma |
| Band: | 12q15 |
| Quick Links | Entrez ID:3458; OMIM: 147570; Uniprot ID:IFNG_HUMAN; ENSEMBL ID: ENSG00000111537; HGNC ID: 5438 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 24 | Pyrrolidone carboxylic acid. | |
| 48 | N-linked (GlcNAc...). | |
| 120 | N-linked (GlcNAc...); in dimeric form. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 24 | Pyrrolidone carboxylic acid. | Swiss-Prot 53.0 |
| 48 | N-linked (GlcNAc...). | Swiss-Prot 53.0 |
| 120 | N-linked (GlcNAc...); in dimeric form. | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 48 | N-linked | HMM predict |
| 120 | N-linked | HMM predict |
| 121 | Phosphotyrosine(INSR) | HMM predict |
| 149 | Phosphothreonine(PKC) | HMM predict |
| 155 | Phosphoserine(PKA) | HMM predict |
| 155 | Phosphoserine(PKG) | HMM predict |
| 163 | Arginine | HMM predict |
- RefSeq ID: NM_000619
- Location:chr12 66834816-66839787
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | H2O2-Hela | GSE14283 | 66853964 | 66853990 | 26 | 14190 |
| Oct1 | H2O2-Hela | GSE14283 | 66854488 | 66854515 | 27 | 14714 |
| Oct1 | Hela | GSE14283 | 66853964 | 66853993 | 29 | 14191 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Nanog | hES | GSE18292 | 66827667 | 66828093 | 426 | 6937 |
| Oct1 | H2O2-Hela | GSE14283 | 66831515 | 66831565 | 50 | 3277 |
| Oct1 | Hela | GSE14283 | 66831515 | 66831565 | 50 | 3277 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 66838495 | 66838763 | 268 | 0 |
| CTCF | CD4 | SISSRdata | 66838495 | 66838763 | 268 | 0 |
| hScc1 | CdLS | GSE12603 | 66838369 | 66838712 | 343 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-let-7a | hsa-let-7a-1 | 9 | 21085987 |
| hsa-let-7a | hsa-let-7a-2 | 11 | 21085987 |
| hsa-let-7a | hsa-let-7a-3 | 22 | 21085987 |
| hsa-let-7b | hsa-let-7b | 22 | 20130213 |
| hsa-let-7b* | hsa-let-7b | 22 | 20130213 |
| hsa-let-7g | hsa-let-7g | 3 | 21085987 |
| hsa-let-7g* | hsa-let-7g | 3 | 21085987 |
| hsa-miR-1274a | hsa-mir-1274a | 0 | 21085987 |
| hsa-miR-142-5p | hsa-mir-142 | 17 | 21085987 |
| hsa-miR-145 | hsa-mir-145 | 5 | 20130213 |
| hsa-miR-145* | hsa-mir-145 | 5 | 20130213 |
| hsa-miR-146a | hsa-mir-146a | 5 | 20857148 |
| hsa-miR-146a | hsa-mir-146a | 5 | 20850013 |
| hsa-miR-146a | hsa-mir-146a | 5 | 18791161 |
| hsa-miR-146a* | hsa-mir-146a | 5 | 20857148 |
| hsa-miR-146a* | hsa-mir-146a | 5 | 20850013 |
| hsa-miR-146a* | hsa-mir-146a | 5 | 18791161 |
| hsa-miR-192 | hsa-mir-192 | 11 | 21085987 |
| hsa-miR-192* | hsa-mir-192 | 11 | 21085987 |
| hsa-miR-193a-3p | hsa-mir-193a | 17 | 21085987 |
| hsa-miR-203 | hsa-mir-203 | 14 | 21093440 |
| hsa-miR-20a | hsa-mir-20a | 13 | 21085987 |
| hsa-miR-20a* | hsa-mir-20a | 13 | 21085987 |
| hsa-miR-21 | hsa-mir-21 | 17 | 21093440 |
| hsa-miR-21* | hsa-mir-21 | 17 | 21093440 |
| hsa-miR-221 | hsa-mir-221 | X | 20110463 |
| hsa-miR-221* | hsa-mir-221 | X | 20110463 |
| hsa-miR-223 | hsa-mir-223 | X | 18791161 |
| hsa-miR-223* | hsa-mir-223 | X | 18791161 |
| hsa-miR-26a | hsa-mir-26a-1 | 3 | 20130213 |
| hsa-miR-26a | hsa-mir-26a-2 | 12 | 20130213 |
| hsa-miR-26a-1* | hsa-mir-26a-1 | 3 | 20130213 |
| hsa-miR-26b | hsa-mir-26b | 2 | 21085987 |
| hsa-miR-26b* | hsa-mir-26b | 2 | 21085987 |
| hsa-miR-29a | hsa-mir-29a | 7 | 20857148 |
| hsa-miR-29a* | hsa-mir-29a | 7 | 20857148 |
| hsa-miR-30d | hsa-mir-30d | 8 | 20857148 |
| hsa-miR-30d* | hsa-mir-30d | 8 | 20857148 |
| hsa-miR-34a | hsa-mir-34a | 1 | 20857148 |
| hsa-miR-34a | hsa-mir-34a | 1 | 20130213 |
| hsa-miR-34a* | hsa-mir-34a | 1 | 20857148 |
| hsa-miR-34a* | hsa-mir-34a | 1 | 20130213 |
| hsa-miR-375 | hsa-mir-375 | 2 | 20857148 |
| hsa-miR-377 | hsa-mir-377 | 14 | 21085987 |
| hsa-miR-377* | hsa-mir-377 | 14 | 21085987 |
| hsa-miR-450b-5p | hsa-mir-450b | X | 21085987 |
| hsa-miR-9 | hsa-mir-9-1 | 1 | 20857148 |
| hsa-miR-9 | hsa-mir-9-2 | 5 | 20857148 |
| hsa-miR-9 | hsa-mir-9-3 | 15 | 20857148 |
| hsa-miR-9 | hsa-mir-9-1 | 1 | 19289835 |
| hsa-miR-9 | hsa-mir-9-2 | 5 | 19289835 |
| hsa-miR-9 | hsa-mir-9-3 | 15 | 19289835 |
| hsa-miR-9* | hsa-mir-9-1 | 1 | 19289835 |
| hsa-miR-98 | hsa-mir-98 | X | 21085987 |
| No data |
Cis-Nats regulation