Annotation Detail for LRRTM1
Basic Information Top
| Gene Symbol: | LRRTM1 ( FLJ32082 ) |
|---|---|
| Gene Full Name: | leucine rich repeat transmembrane neuronal 1 |
| Band: | 2p12 |
| Quick Links | Entrez ID:347730; OMIM: 610867; Uniprot ID:LRRT1_HUMAN; ENSEMBL ID: ENSG00000162951; HGNC ID: 19408 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 56 | N-linked (GlcNAc...) (Potential). | |
| 63 | N-linked (GlcNAc...) (Potential). | |
| 130 | N-linked (GlcNAc...) (Potential). | |
| 380 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 56 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 63 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 130 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 380 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 37 | Phosphoserine(IKK) | HMM predict |
| 56 | N-linked | HMM predict |
| 121 | Phosphoserine(CK1) | HMM predict |
| 130 | N-linked | HMM predict |
| 239 | S-palmitoyl | HMM predict |
| 264 | Phosphoserine(ATM) | HMM predict |
| 270 | Phosphotyrosine(INSR) | HMM predict |
| 294 | Phosphotyrosine(INSR) | HMM predict |
| 347 | Phosphotyrosine(Jak) | HMM predict |
| 347 | Phosphotyrosine(Abl) | HMM predict |
| 380 | N-linked | HMM predict |
| 390 | O-linked | HMM predict |
| 392 | O-linked | HMM predict |
| 488 | Phosphotyrosine(Syk) | HMM predict |
| 489 | Phosphotyrosine(Syk) | HMM predict |
| 489 | Sulfotyrosine | HMM predict |
- RefSeq ID: NM_178839
- Location:chr2 80382513-80384997
- strand:-
| No data |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 80382876 | 80383559 | 683 | 0 |
| CTCF | G2 | GSE9613 | 80383995 | 80384436 | 441 | 0 |
| H3K27me3 | colorectal | cancer | 80382573 | 80383127 | 554 | 0 |
| H3K27me3 | colorectal | cancer | 80384564 | 80385126 | 562 | 0 |
| hScc1 | Bcell | GSE12603 | 80383231 | 80383454 | 223 | 0 |
Validated miRNA targets