AutismKB 2.0

Annotation Detail for INPP4A


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Basic Information Top
Gene Symbol:INPP4A ( INPP4,TVAS1 )
Gene Full Name: inositol polyphosphate-4-phosphatase, type I, 107kDa
Band: 2q11.2
Quick LinksEntrez ID:3631; OMIM: 600916; Uniprot ID:INP4A_HUMAN; ENSEMBL ID: ENSG00000040933; HGNC ID: 6074
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
487Phosphoserine.
Location(AA) Modifications Resource
355PhosphotyrosinePhospho.ELM 6.0
Location(AA) Modification Resource
7PhosphoserineHMM predict
71O-linkedHMM predict
74PhosphothreonineHMM predict
74Phosphothreonine(CDK)HMM predict
165N-linkedHMM predict
255Phosphoserine(CK1)HMM predict
308N-linkedHMM predict
315Phosphotyrosine(INSR)HMM predict
319Phosphoserine(PKC)HMM predict
323Phosphoserine(CDC2)HMM predict
355Phosphotyrosine(Syk)HMM predict
462S-palmitoylHMM predict
487Phosphoserine(IKK)HMM predict
487Phosphoserine(CDC2)HMM predict
490Phosphoserine(CK2)HMM predict
491Phosphothreonine(CK2)HMM predict
514Phosphoserine(PKG)HMM predict
595O-linkedHMM predict
595Phosphoserine(IKK)HMM predict
595Phosphoserine(CDC2)HMM predict
599O-linkedHMM predict
603O-linkedHMM predict
615Phosphoserine(ATM)HMM predict
621Phosphoserine(CK1)HMM predict
635O-linkedHMM predict
663O-linkedHMM predict
666O-linkedHMM predict
717Phosphoserine(IKK)HMM predict
720Phosphoserine(CK1)HMM predict
741N-linkedHMM predict
747O-linkedHMM predict
754Phosphoserine(CAMK2)HMM predict
808Phosphothreonine(PKC)HMM predict
942Phosphothreonine(PKA)HMM predict
972Phosphotyrosine(SRC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001566
  • Location:chr2 98427844-98564715
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 98414339 98414372 33 13489
ER Fulvestrant-MCF7GSE14664 98414340 98414375 35 13487
Oct1 HelaGSE14283 98414339 98414382 43 13484
p63 keratinocytesGSE17611 98418383 98418989 606 9159
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 98439894 98440723 829 0
CTCF CD4GSE12889 98448709 98448898 189 0
CTCF CD4GSE12889 98470892 98471071 179 0
CTCF CD4GSE12889 98500944 98501281 337 0
CTCF CD4GSE12889 98552151 98552387 236 0
CTCF CD4SISSRdata 98448709 98448898 189 0
CTCF CD4SISSRdata 98470892 98471071 179 0
CTCF CD4SISSRdata 98500944 98501281 337 0
CTCF CD4SISSRdata 98552151 98552387 236 0
CTCF JurkatGSE12889 98552023 98552524 501 0
CTCF G2GSE9613 98427573 98428377 804 0
CTCF G2GSE9613 98441911 98442076 165 0
CTCF G2GSE9613 98456257 98456434 177 0
CTCF G2GSE9613 98507465 98507637 172 0
CTCF G2GSE9613 98538560 98539015 455 0
CTCF G2GSE9613 98547421 98547767 346 0
CTCF G2GSE9613 98550292 98550727 435 0
CTCF G2GSE9613 98551708 98553442 1734 0
CTCF G2GSE9613 98553922 98554775 853 0
CTCF G2GSE9613 98556330 98556592 262 0
CTCF G2GSE9613 98561218 98561551 333 0
ER Fulvestrant-MCF7GSE14664 98446120 98446159 39 0
FOXA1 MCF7GSE15244 98467854 98468437 583 0
Myc K562GSE19551 98543087 98543623 536 0
Nanog ESGSE20650 98477531 98478077 546 0
Oct1 HelaGSE14283 98446126 98446161 35 0
Oct1 HelaGSE14283 98466875 98466937 62 0
Oct1 HelaGSE14283 98467209 98467239 30 0
Oct1 HelaGSE14283 98523379 98523408 29 0
P300 T30-glioblastomaGSE21026 98439887 98440883 996 0
RARA MCF7GSE15244 98465966 98466531 565 0
Rb GrowingGSE19898 98438277 98438524 247 0
Rb SenescentGSE19898 98463307 98463571 264 0
TFAP2C MCF7GSE21234 98462785 98463890 1105 0
TFAP2C MCF7GSE21234 98466150 98466616 466 0
USF1 HepG2E 98466428 98468700 2272 0
VDR GM10855-stimGSE22484 98452510 98454780 2270 0
VDR GM10861-stimGSE22484 98441328 98445275 3947 0
VDR GM10861-stimGSE22484 98452385 98455643 3258 0
hScc1 BcellGSE12603 98427618 98428294 676 0
hScc1 BcellGSE12603 98448703 98448876 173 0
hScc1 BcellGSE12603 98500922 98501446 524 0
hScc1 BcellGSE12603 98559704 98560088 384 0
hScc1 CdLSGSE12603 98500922 98501383 461 0
hScc1 G2GSE9613 98427573 98428443 870 0
hScc1 G2GSE9613 98552768 98553420 652 0
p130 SenescentGSE19898 98455285 98455559 274 0
p63 keratinocytesGSE17611 98433628 98434455 827 0
p63 keratinocytesGSE17611 98550870 98552051 1181 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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