AutismKB 2.0

Annotation Detail for ITGB5


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Basic Information Top
Gene Symbol:ITGB5 ( FLJ26658 )
Gene Full Name: integrin, beta 5
Band: 3q21.2
Quick LinksEntrez ID:3693; OMIM: 147561; Uniprot ID:ITB5_HUMAN; ENSEMBL ID: ENSG00000082781; HGNC ID: 6160
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
347N-linked (GlcNAc...) (Potential).
460N-linked (GlcNAc...) (Potential).
477N-linked (GlcNAc...) (Potential).
505N-linked (GlcNAc...) (Potential).
552N-linked (GlcNAc...) (Potential).
586N-linked (GlcNAc...) (Potential).
654N-linked (GlcNAc...) (Potential).
705N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
347N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
460N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
477N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
505N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
552N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
586N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
654N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
705N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
35Phosphoserine(IKK)HMM predict
46S-palmitoylHMM predict
61Phosphothreonine(PKA)HMM predict
199Phosphothreonine(PKC)HMM predict
347N-linkedHMM predict
460N-linkedHMM predict
477N-linkedHMM predict
482Phosphotyrosine(INSR)HMM predict
505N-linkedHMM predict
511N-linkedHMM predict
552N-linkedHMM predict
558N-linkedHMM predict
631S-palmitoylHMM predict
654N-linkedHMM predict
705N-linkedHMM predict
791N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002213
  • Location:chr3 125964485-126088833
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 126092373 126092403 30 3555
p130 SenescentGSE19898 126088859 126089356 497 274
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 125962663 125963251 588 1529
CTCF CD4GSE12889 125962826 125963037 211 1554
CTCF CD4SISSRdata 125962826 125963037 211 1554
CTCF G2GSE9613 125961656 125961925 269 2695
CTCF G2GSE9613 125962892 125963068 176 1506
FOXA1 MCF7GSE15244 125963399 125964404 1005 584
P300 T30-glioblastomaGSE21026 125962645 125963295 650 1516
RARA MCF7GSE15244 125963399 125964190 791 691
RARG MCF7GSE15244 125963399 125964475 1076 549
hScc1 BcellGSE12603 125961694 125961925 231 2676
hScc1 BcellGSE12603 125962892 125963068 176 1506
hScc1 CdLSGSE12603 125962892 125963068 176 1506
hScc1 G2GSE9613 125962892 125963068 176 1506
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 126036339 126037708 1369 0
CBP T30-glioblastomaGSE21026 126079702 126081222 1520 0
CTCF JurkatGSE12889 125970466 125970729 263 0
CTCF G2GSE9613 125970431 125970607 176 0
CTCF G2GSE9613 125978758 125978977 219 0
CTCF G2GSE9613 125988006 125988639 633 0
CTCF G2GSE9613 125993121 125993363 242 0
CTCF G2GSE9613 126002911 126003307 396 0
CTCF G2GSE9613 126004286 126004466 180 0
CTCF G2GSE9613 126014390 126014728 338 0
CTCF G2GSE9613 126016573 126016900 327 0
CTCF G2GSE9613 126031232 126031441 209 0
CTCF G2GSE9613 126032963 126033177 214 0
CTCF G2GSE9613 126036244 126037566 1322 0
CTCF G2GSE9613 126044131 126044445 314 0
CTCF G2GSE9613 126060762 126061049 287 0
CTCF G2GSE9613 126069808 126070009 201 0
CTCF G2GSE9613 126087711 126089148 1437 0
ER MCF7GSE19013 125978381 125978830 449 0
ER MCF7GSE19013 126038953 126039901 948 0
FOXA1 MCF7GSE15244 125973549 125974215 666 0
FOXA1 MCF7GSE15244 125987569 125988937 1368 0
FOXA1 MCF7GSE15244 125990895 125992228 1333 0
FOXA1 MCF7GSE15244 126013907 126014753 846 0
FOXA1 MCF7GSE15244 126016297 126016798 501 0
FOXA1 MCF7GSE15244 126028185 126028570 385 0
FOXA1 MCF7GSE15244 126036313 126037157 844 0
FOXA1 MCF7GSE15244 126038636 126039556 920 0
FOXA1 MCF7GSE15244 126080017 126081021 1004 0
Fos K562GSE19551 126014173 126014775 602 0
FoxA1 MCF7MACSdata 126016232 126016526 294 0
Gata2 K562GSE18868 126039112 126039733 621 0
Gata2 K562GSE18868 126078001 126078498 497 0
H3ac HepG2E 126036244 126037566 1322 0
H3ac HepG2E 126038259 126039056 797 0
H3ac HepG2E 126084111 126085250 1139 0
H3ac HepG2E 126086908 126087471 563 0
KLF4 hESGSE17917 126036712 126036871 159 0
Nanog hESGSE18292 126028020 126028651 631 0
Oct1 H2O2-HelaGSE14283 125984527 125984593 66 0
Oct1 HelaGSE14283 125983814 125983858 44 0
Oct1 HelaGSE14283 125984547 125984592 45 0
Oct1 HelaGSE14283 125988792 125988837 45 0
Oct1 HelaGSE14283 126036025 126036052 27 0
Oct4 hESGSE21916 126028028 126028672 644 0
P300 T30-glioblastomaGSE21026 126014036 126014944 908 0
P300 T30-glioblastomaGSE21026 126061813 126062903 1090 0
P300 T30-glioblastomaGSE21026 126079771 126081217 1446 0
PHF8 Hs68plusFBSGSE20725 126087229 126089384 2155 0
RARA MCF7GSE15244 125970431 125970890 459 0
RARA MCF7GSE15244 125972762 125972970 208 0
RARA MCF7GSE15244 125973415 125974405 990 0
RARA MCF7GSE15244 125978641 125979763 1122 0
RARA MCF7GSE15244 125987469 125989407 1938 0
RARA MCF7GSE15244 125989849 125992266 2417 0
RARA MCF7GSE15244 126010288 126011325 1037 0
RARA MCF7GSE15244 126016297 126016829 532 0
RARA MCF7GSE15244 126020217 126020703 486 0
RARA MCF7GSE15244 126023963 126024479 516 0
RARA MCF7GSE15244 126031829 126032069 240 0
RARA MCF7GSE15244 126036244 126037566 1322 0
RARA MCF7GSE15244 126038259 126039556 1297 0
RARA MCF7GSE15244 126079691 126081371 1680 0
RARG MCF7GSE15244 125973342 125974405 1063 0
RARG MCF7GSE15244 125987569 125989407 1838 0
RARG MCF7GSE15244 125989921 125992203 2282 0
RARG MCF7GSE15244 126010288 126011325 1037 0
RARG MCF7GSE15244 126013748 126014753 1005 0
RARG MCF7GSE15244 126016297 126016829 532 0
RARG MCF7GSE15244 126024184 126024479 295 0
RARG MCF7GSE15244 126028185 126028400 215 0
RARG MCF7GSE15244 126036244 126037566 1322 0
RARG MCF7GSE15244 126038496 126039556 1060 0
RARG MCF7GSE15244 126079691 126081094 1403 0
Sox2 hESGSE18292 126028073 126028531 458 0
Stat6 IL-4-hr4GSE17850 125981588 125982086 498 0
TFAP2C MCF7GSE21234 126010763 126011304 541 0
TFAP2C MCF7GSE21234 126039261 126039733 472 0
USF1 HepG2E 126036244 126037566 1322 0
USF1 HepG2E 126038296 126038813 517 0
USF2 HepG2E 126036244 126037566 1322 0
VDR GM10855-stimGSE22484 125985282 125987218 1936 0
VDR GM10861-stimGSE22484 125985551 125986996 1445 0
hScc1 BcellGSE12603 125975286 125975723 437 0
hScc1 BcellGSE12603 126088364 126089148 784 0
hScc1 CdLSGSE12603 125970431 125970710 279 0
hScc1 CdLSGSE12603 126036277 126037121 844 0
hScc1 G2GSE9613 125970431 125970637 206 0
hScc1 G2GSE9613 125988042 125988711 669 0
hScc1 G2GSE9613 126014435 126014753 318 0
hScc1 G2GSE9613 126080228 126080792 564 0
hScc1 G2GSE9613 126087395 126089415 2020 0
p130 shRbQuiescentGSE19898 126021387 126021882 495 0
p130 shRbSenescentGSE19898 126060798 126060917 119 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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