AutismKB 2.0

Annotation Detail for JARID2


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Basic Information Top
Gene Symbol:JARID2 ( JMJ )
Gene Full Name: jumonji, AT rich interactive domain 2
Band: 6p22.3
Quick LinksEntrez ID:3720; OMIM: 601594; Uniprot ID:JARD2_HUMAN; ENSEMBL ID: ENSG00000008083; HGNC ID: 6196
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
110Nuclear localization signal (By
378N6-acetyllysine.
878GSGFP motif.
Location(AA) Modifications Resource
Location(AA) Modification Resource
18Phosphoserine(ATM)HMM predict
75Phosphoserine(CK2)HMM predict
78Phosphoserine(CK2)HMM predict
86Phosphoserine(ATM)HMM predict
86Phosphoserine(IKK)HMM predict
89Phosphoserine(IKK)HMM predict
98Phosphoserine(CK2)HMM predict
120Phosphoserine(ATM)HMM predict
124Phosphoserine(CDK)HMM predict
124O-linkedHMM predict
124Phosphoserine(CDC2)HMM predict
124Phosphoserine(IKK)HMM predict
124Phosphoserine(MAPK)HMM predict
126O-linkedHMM predict
154Phosphothreonine(PKC)HMM predict
162S-palmitoylHMM predict
166PhosphoserineHMM predict
201N-linkedHMM predict
209Phosphothreonine(CDC2)HMM predict
226N-linkedHMM predict
232Phosphothreonine(PKC)HMM predict
247PhosphothreonineHMM predict
247Phosphothreonine(MAPK)HMM predict
260Phosphoserine(PKC)HMM predict
275O-linkedHMM predict
275O-linkedHMM predict
278O-linkedHMM predict
320Phosphothreonine(PKC)HMM predict
331Phosphoserine(CDC2)HMM predict
331Phosphoserine(CDK)HMM predict
335O-linkedHMM predict
372N-linkedHMM predict
455Phosphoserine(CDC2)HMM predict
455Phosphoserine(CDK)HMM predict
493Phosphoserine(CK1)HMM predict
508Phosphothreonine(MAPK)HMM predict
524N-linkedHMM predict
528Phosphoserine(ATM)HMM predict
528Phosphoserine(CK1)HMM predict
528Phosphoserine(IKK)HMM predict
641Phosphothreonine(CK2)HMM predict
784Phosphothreonine(PKC)HMM predict
821Phosphoserine(PKG)HMM predict
891N-linkedHMM predict
897N-linkedHMM predict
898N-linkedHMM predict
971N-linkedHMM predict
1004Phosphoserine(CDK)HMM predict
1204N-linkedHMM predict
1209N-linkedHMM predict
1212Phosphoserine(CK1)HMM predict
1215Phosphothreonine(CDC2)HMM predict
1225Phosphothreonine(PKA)HMM predict
1239Phosphoserine(CK1)HMM predict
1241Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004973
  • Location:chr6 15354505-15630230
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 15352844 15353243 399 1462
CTCF G2GSE9613 15353897 15354172 275 471
ER E2-MCF7GSE14664 15346759 15346836 77 7708
ETS1 JurkatGSE17954 15353270 15354458 1188 642
Nanog hESGSE18292 15335650 15336109 459 18626
Oct1 HelaGSE14283 15337412 15337491 79 17054
RARA MCF7GSE15244 15352372 15352706 334 1967
TFAP2C MCF7GSE21234 15353848 15354250 402 457
hScc1 BcellGSE12603 15352612 15353367 755 1516
hScc1 CdLSGSE12603 15353968 15354636 668 204
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 15435556 15435812 256 0
CTCF CD4GSE12889 15549557 15549753 196 0
CTCF CD4GSE12889 15572542 15572859 317 0
CTCF CD4GSE12889 15599631 15599973 342 0
CTCF CD4SISSRdata 15435556 15435812 256 0
CTCF CD4SISSRdata 15549557 15549753 196 0
CTCF CD4SISSRdata 15572542 15572859 317 0
CTCF CD4SISSRdata 15599631 15599973 342 0
CTCF G2GSE9613 15356166 15356405 239 0
CTCF G2GSE9613 15356921 15357283 362 0
CTCF G2GSE9613 15498478 15499128 650 0
CTCF G2GSE9613 15549370 15549886 516 0
CTCF G2GSE9613 15563004 15563227 223 0
CTCF G2GSE9613 15572394 15572955 561 0
CTCF G2GSE9613 15599517 15600215 698 0
CTCF G2GSE9613 15603717 15603852 135 0
CTCF G2GSE9613 15604579 15605146 567 0
CTCF G2GSE9613 15607898 15608143 245 0
CTCF G2GSE9613 15610312 15610565 253 0
CTCF G2GSE9613 15617686 15617859 173 0
CTCF G2GSE9613 15620485 15620779 294 0
CTCF G2GSE9613 15621205 15621584 379 0
CTCF G2GSE9613 15622426 15622618 192 0
CTCF G2GSE9613 15625817 15626158 341 0
ER MCF7GSE19013 15359523 15359997 474 0
FOXA1 MCF7GSE15244 15564041 15564432 391 0
Fos K562GSE19551 15617491 15618216 725 0
FoxA1 MCF7MACSdata 15362806 15362990 184 0
FoxA1 MCF7MACSdata 15555057 15555229 172 0
FoxA1 MCF7MACSdata 15564062 15564296 234 0
FoxA1 MCF7MACSdata 15564813 15564977 164 0
GABP k562GSE8489 15408163 15409411 1248 0
H3K4me3 colorectalcancer 15354527 15356166 1639 0
H3ac HepG2E 15353744 15356232 2488 0
H3ac HepG2E 15387683 15388304 621 0
H3ac HepG2E 15431221 15431594 373 0
Myc K562GSE19551 15372085 15372720 635 0
NFkBII GM12878GSE19485 15424650 15427442 2792 0
NFkBII GM12878GSE19485 15432996 15435750 2754 0
Nanog hESGSE18292 15601915 15602283 368 0
Oct1 H2O2-HelaGSE14283 15423643 15423672 29 0
Oct1 H2O2-HelaGSE14283 15474852 15474894 42 0
Oct1 H2O2-HelaGSE14283 15505808 15505842 34 0
Oct1 H2O2-HelaGSE14283 15560570 15560596 26 0
Oct1 H2O2-HelaGSE14283 15587736 15587766 30 0
Oct1 HelaGSE14283 15423629 15423672 43 0
Oct1 HelaGSE14283 15474852 15474890 38 0
RARA MCF7GSE15244 15354608 15355142 534 0
RARA MCF7GSE15244 15553099 15554018 919 0
RARA MCF7GSE15244 15554550 15555727 1177 0
RARA MCF7GSE15244 15564041 15565021 980 0
RARA MCF7GSE15244 15570825 15571593 768 0
RARA MCF7GSE15244 15587724 15588294 570 0
RARG MCF7GSE15244 15554940 15555773 833 0
RNAII Tamoxifen-MCF7GSE14664 15505808 15505846 38 0
Rb shRbSenescenceGSE19898 15540004 15540195 191 0
TAF HelaGSE8489 15354172 15356201 2029 0
TAF k562GSE8489 15354172 15356405 2233 0
TAF k562GSE8489 15407657 15410074 2417 0
TFAP2C MCF7GSE21234 15362793 15363254 461 0
TFAP2C MCF7GSE21234 15549329 15549932 603 0
TFAP2C MCF7GSE21234 15563881 15564491 610 0
hScc1 BcellGSE12603 15356091 15356405 314 0
hScc1 BcellGSE12603 15356921 15357348 427 0
hScc1 BcellGSE12603 15362018 15362414 396 0
hScc1 BcellGSE12603 15407730 15408194 464 0
hScc1 BcellGSE12603 15435339 15435934 595 0
hScc1 BcellGSE12603 15443767 15443994 227 0
hScc1 BcellGSE12603 15498334 15498920 586 0
hScc1 BcellGSE12603 15532073 15532316 243 0
hScc1 BcellGSE12603 15549227 15549950 723 0
hScc1 BcellGSE12603 15599445 15599960 515 0
hScc1 BcellGSE12603 15610021 15610676 655 0
hScc1 BcellGSE12603 15621319 15622546 1227 0
hScc1 CdLSGSE12603 15362018 15362726 708 0
hScc1 CdLSGSE12603 15407360 15408264 904 0
hScc1 CdLSGSE12603 15435339 15436088 749 0
hScc1 CdLSGSE12603 15467142 15467887 745 0
hScc1 CdLSGSE12603 15498191 15499055 864 0
hScc1 CdLSGSE12603 15549263 15549950 687 0
hScc1 CdLSGSE12603 15553198 15553718 520 0
hScc1 CdLSGSE12603 15599318 15599999 681 0
hScc1 G2GSE9613 15498406 15499028 622 0
hScc1 G2GSE9613 15549370 15549886 516 0
hScc1 G2GSE9613 15599517 15599999 482 0
p130 shRbSenescentGSE19898 15443726 15443906 180 0
p63 keratinocytesGSE17611 15478744 15479697 953 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-1 hsa-mir-1-2 18 19229884
hsa-miR-1 hsa-mir-1-1 20 19229884
hsa-miR-125b hsa-mir-125b-1 11 18056640
hsa-miR-125b hsa-mir-125b-2 21 18056640
hsa-miR-142-3p hsa-mir-142 17 19229884
hsa-miR-155 hsa-mir-155 21 19759154
hsa-miR-155* hsa-mir-155 21 19759154
hsa-miR-331-3p hsa-mir-331 12 19229884
hsa-miR-331-5p hsa-mir-331 12 19229884
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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