AutismKB 2.0

Annotation Detail for KCND3


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Basic Information Top
Gene Symbol:KCND3 ( KCND3L,KCND3S,KSHIVB,KV4.3,MGC142035,MGC142037 )
Gene Full Name: potassium voltage-gated channel, Shal-related subfamily, member 3
Band: 1p13.2
Quick LinksEntrez ID:3752; OMIM: 605411; Uniprot ID:KCND3_HUMAN; ENSEMBL ID: ENSG00000171385; HGNC ID: 6239
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
372Selectivity filter (By similarity).
435Phosphothreonine.
441Phosphotyrosine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
45N-linkedHMM predict
82SulfotyrosineHMM predict
133Phosphotyrosine(Syk)HMM predict
136Phosphotyrosine(Syk)HMM predict
151N-linkedHMM predict
153Phosphoserine(CK1)HMM predict
155N-linkedHMM predict
156N-linkedHMM predict
180Phosphothreonine(Jak)HMM predict
353Phosphoserine(IKK)HMM predict
361O-linkedHMM predict
364O-linkedHMM predict
370Phosphotyrosine(INSR)HMM predict
370SulfotyrosineHMM predict
405N-linkedHMM predict
470Phosphoserine(CAMK2)HMM predict
474Phosphoserine(ATM)HMM predict
531O-linkedHMM predict
533Phosphoserine(IKK)HMM predict
535O-linkedHMM predict
535Phosphoserine(PKC)HMM predict
535Phosphoserine(PKB)HMM predict
543O-linkedHMM predict
546S-palmitoylHMM predict
547S-palmitoylHMM predict
569Phosphoserine(CAMK2)HMM predict
585Phosphoserine(CK1)HMM predict
585Phosphoserine(IKK)HMM predict
587Phosphothreonine(PKC)HMM predict
588Phosphothreonine(PKC)HMM predict
612O-linkedHMM predict
616O-linkedHMM predict
616O-linkedHMM predict
624PhosphothreonineHMM predict
624Phosphothreonine(CDK)HMM predict
624Phosphothreonine(MAPK)HMM predict
624Phosphothreonine(CDC2)HMM predict
635O-linkedHMM predict
635Phosphoserine(CDC2)HMM predict
635Phosphoserine(MAPK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004980
  • Location:chr1 112119976-112333299
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 112333378 112334617 1239 698
Nanog hESGSE18292 112351230 112351623 393 18127
Oct4 ESGSE20650 112346687 112347090 403 13589
Oct4 hESGSE21916 112346430 112347013 583 13422
hScc1 BcellGSE12603 112333305 112334252 947 479
hScc1 BcellGSE12603 112334617 112335234 617 1626
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 112145426 112146070 644 0
CTCF G2GSE9613 112156912 112157248 336 0
CTCF G2GSE9613 112191865 112192207 342 0
CTCF G2GSE9613 112232180 112232523 343 0
CTCF G2GSE9613 112281353 112281632 279 0
CTCF G2GSE9613 112326099 112326291 192 0
CTCF G2GSE9613 112327511 112327840 329 0
ER MCF7GSE19013 112237573 112238195 622 0
FOXA1 MCF7GSE15244 112261752 112262760 1008 0
FOXA1 MCF7GSE15244 112319500 112321804 2304 0
FOXA1 MCF7GSE15244 112332006 112333305 1299 0
FoxA1 MCF7MACSdata 112148554 112148734 180 0
FoxA1 MCF7MACSdata 112320425 112321562 1137 0
H3K27me3 colorectalcancer 112331696 112333183 1487 0
H3K4me3 colorectalcancer 112332733 112333124 391 0
KLF4 hESGSE17917 112278223 112278426 203 0
NRSF JurkatGSE13047 112176925 112178435 1510 0
NRSF JurkatGSE13047 112208658 112209697 1039 0
NRSF mAbJurkat 112171332 112171550 218 0
NRSF mAbJurkat 112172836 112174582 1746 0
NRSF mAbJurkat 112175075 112175364 289 0
NRSF mAbJurkat 112175819 112178613 2794 0
NRSF mAbJurkat 112179074 112179471 397 0
NRSF mAbJurkat 112180122 112181106 984 0
NRSF mAbJurkat 112188329 112190065 1736 0
NRSF mAbJurkat 112203420 112203739 319 0
NRSF mAbJurkat 112204581 112205316 735 0
NRSF mAbJurkat 112205769 112209717 3948 0
NRSF mAbJurkat 112211340 112211954 614 0
NRSF mAbJurkat 112213218 112213745 527 0
NRSF mAbJurkat 112214523 112216182 1659 0
NRSF mAbJurkat 112216593 112216956 363 0
NRSF mAbJurkat 112233937 112234888 951 0
NRSF mAbJurkat 112315322 112316286 964 0
NRSF mAbJurkat 112316628 112317352 724 0
NRSF-mono JurkatQuESTdata 112176864 112178474 1610 0
NRSF-mono JurkatQuESTdata 112208657 112209661 1004 0
NRSF-mono JurkatQuESTdata 112264823 112265061 238 0
NRSF-poly JurkatQuESTdata 112177078 112178288 1210 0
NRSF-poly JurkatQuESTdata 112208321 112209705 1384 0
NRSF-poly JurkatQuESTdata 112264851 112265113 262 0
Nanog hESGSE18292 112197545 112197833 288 0
Nanog hESGSE18292 112230852 112231060 208 0
Nanog hESGSE18292 112307901 112308254 353 0
Oct1 H2O2-HelaGSE14283 112132676 112132704 28 0
Oct1 H2O2-HelaGSE14283 112146361 112146389 28 0
Oct1 H2O2-HelaGSE14283 112163742 112163770 28 0
Oct1 H2O2-HelaGSE14283 112180685 112180718 33 0
Oct1 H2O2-HelaGSE14283 112312446 112312477 31 0
Oct1 HelaGSE14283 112168900 112168931 31 0
Oct1 HelaGSE14283 112227525 112227560 35 0
Oct4 hESGSE21916 112325202 112325740 538 0
RARA MCF7GSE15244 112171332 112173577 2245 0
RARA MCF7GSE15244 112176791 112177894 1103 0
RARA MCF7GSE15244 112234026 112235514 1488 0
RARA MCF7GSE15244 112239954 112240469 515 0
RARA MCF7GSE15244 112320381 112321733 1352 0
RARA MCF7GSE15244 112322065 112323088 1023 0
RARA MCF7GSE15244 112330088 112331061 973 0
RARA MCF7GSE15244 112331873 112332406 533 0
RARG MCF7GSE15244 112319973 112321519 1546 0
RNAII Tamoxifen-MCF7GSE14664 112144708 112144798 90 0
Rb GrowingGSE19898 112163694 112163902 208 0
TFAP2C MCF7GSE21234 112156177 112156691 514 0
TFAP2C MCF7GSE21234 112281137 112281904 767 0
hScc1 BcellGSE12603 112145932 112146070 138 0
hScc1 BcellGSE12603 112191973 112192281 308 0
hScc1 BcellGSE12603 112308390 112308614 224 0
hScc1 BcellGSE12603 112325365 112325540 175 0
hScc1 BcellGSE12603 112326032 112326354 322 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
1297 EST chr1 112164348 112165594 1246 mRNA KCND3 chr1 112030495 112243819 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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