Annotation Detail for KCNG1

View Evidences	View Variants	View Annotations

Basic Information Top

Gene Symbol:	KCNG1 ( K13,KCNG,KV6.1,MGC12878,kH2 )
Gene Full Name:	potassium voltage-gated channel, subfamily G, member 1
Band:	20q13.13
Quick Links	Entrez ID:3755; OMIM: 603788; Uniprot ID:KCNG1_HUMAN; ENSEMBL ID: ENSG00000026559; HGNC ID: 6248
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:10 results

Location(AA)	Modification
429	Selectivity filter (By similarity).

Location(AA)	Modification	Resource
11	Sulfotyrosine	HMM predict
13	Sulfotyrosine	HMM predict
222	Phosphoserine(IKK)	HMM predict
374	Phosphothreonine(PKA)	HMM predict
385	S-palmitoyl	HMM predict
405	Phosphoserine	HMM predict
410	Phosphoserine(IKK)	HMM predict
434	Phosphoserine(IKK)	HMM predict
435	Phosphothreonine(MAPK)	HMM predict
495	Phosphoserine(ATM)	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_002237
Location:chr20 49053600-49060281
strand:-

Upstream the gene:0 results
Downstream the gene:13 results
Inside the gene:0 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	49037682	49038000	318	15760
CTCF	CD4	GSE12889	49043030	49043232	202	10470
CTCF	CD4	SISSRdata	49037682	49038000	318	15760
CTCF	CD4	SISSRdata	49043030	49043232	202	10470
CTCF	Hela	GSE12889	49037733	49037978	245	15745
CTCF	Jurkat	GSE12889	49037630	49037998	368	15787
CTCF	G2	GSE9613	49037608	49038091	483	15751
Fos	K562	GSE19551	49042885	49043534	649	10391
TFAP2C	MCF7	GSE21234	49042275	49043337	1062	10795
hScc1	Bcell	GSE12603	49037608	49038379	771	15607
hScc1	CdLS	GSE12603	49037608	49038379	771	15607
hScc1	G2	GSE9613	49037608	49038379	771	15607
p63	keratinocytes	GSE17611	49042051	49043063	1012	11044

Validated miRNA targets

miR Walk:2 results
Tarbase V5.0:0 results

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-miR-146a	hsa-mir-146a	5	20023696
hsa-miR-146a*	hsa-mir-146a	5	20023696

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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