AutismKB 2.0

Annotation Detail for USP17L2


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Basic Information Top
Gene Symbol:USP17L2 ( DUB3 )
Gene Full Name: ubiquitin specific peptidase 17-like 2
Band: 8p23.1
Quick LinksEntrez ID:377630; OMIM: 610186; Uniprot ID:U17L2_HUMAN; ENSEMBL ID: ENSG00000223443; HGNC ID: 34434
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_201402
  • Location:chr4 8969206-8970797
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 8951411 8951574 163 17714
CTCF G2GSE9613 8955682 8956218 536 13257
CTCF G2GSE9613 8960537 8960963 426 8457
CTCF G2GSE9613 8965208 8965775 567 3715
E2F4 G0GSE7516 8961929 8962623 694 6931
GABP HelaGSE8489 8949350 8951795 2445 18634
GABP HelaGSE8489 8954132 8956566 2434 13858
GABP HelaGSE8489 8958840 8961311 2471 9131
GABP HelaGSE8489 8963585 8966030 2445 4399
hScc1 BcellGSE12603 8950011 8951978 1967 18212
hScc1 BcellGSE12603 8952294 8953615 1321 16252
hScc1 BcellGSE12603 8954688 8958360 3672 12683
hScc1 BcellGSE12603 8959501 8963142 3641 7885
hScc1 BcellGSE12603 8963800 8967814 4014 3400
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 8974699 8975137 438 4121
CTCF G2GSE9613 8979266 8979626 360 8649
CTCF G2GSE9613 8984889 8985115 226 14205
CTCF G2GSE9613 8985796 8986621 825 15411
GABP HelaGSE8489 12022973 12025438 2465 7881
GABP HelaGSE8489 12027616 12029026 1410 3766
GABP HelaGSE8489 12029297 12029966 669 2455
GABP HelaGSE8489 12030789 12031564 775 910
GABP HelaGSE8489 8973112 8975521 2409 3519
Oct1 HelaGSE14283 8990207 8990248 41 19430
hScc1 BcellGSE12603 12023194 12023988 794 8496
hScc1 BcellGSE12603 12027303 12028924 1621 3973
hScc1 BcellGSE12603 8968991 8972735 3744 66
hScc1 BcellGSE12603 8973041 8975810 2769 3628
hScc1 BcellGSE12603 8976274 8977378 1104 6029
hScc1 BcellGSE12603 8977858 8979846 1988 8055
hScc1 G2GSE9613 8985796 8986481 685 15341
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 8969775 8970453 678 0
GABP HelaGSE8489 12032172 12035078 2906 0
GABP HelaGSE8489 8968330 8970801 2471 0
hScc1 BcellGSE12603 12032622 12033519 897 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
25082 mRNA chr8 12011167 12075070 1593 mRNA DUB3 chr8 12032085 12033678 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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