AutismKB 2.0

Annotation Detail for KCNN2


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Basic Information Top
Gene Symbol:KCNN2 ( KCa2.2,SK2,SKCA2,hSK2 )
Gene Full Name: potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
Band: 5q22.3
Quick LinksEntrez ID:3781; OMIM: 605879; Uniprot ID:KCNN2_HUMAN; ENSEMBL ID: ENSG00000080709; HGNC ID: 6291
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
39O-linkedHMM predict
48PhosphoserineHMM predict
48Phosphoserine(ATM)HMM predict
48O-linkedHMM predict
50O-linkedHMM predict
60O-linkedHMM predict
89O-linkedHMM predict
109Phosphoserine(CDC2)HMM predict
135Phosphoserine(PKA)HMM predict
232N-linkedHMM predict
248O-linkedHMM predict
250O-linkedHMM predict
251O-linkedHMM predict
560Phosphoserine(CK1)HMM predict
561Phosphoserine(CDC2)HMM predict
567Phosphoserine(PKG)HMM predict
567Phosphoserine(PKA)HMM predict
567Phosphoserine(PKA)HMM predict
568Phosphoserine(PKG)HMM predict
568Phosphoserine(PKA)HMM predict
568O-linkedHMM predict
568Phosphoserine(PKB)HMM predict
568Phosphoserine(IKK)HMM predict
569O-linkedHMM predict
569Phosphoserine(PKB)HMM predict
569Phosphoserine(IKK)HMM predict
569Phosphoserine(PKA)HMM predict
570O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_021614
  • Location:chr5 113725914-113860094
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 113724419 113724951 532 1230
Oct1 HelaGSE14283 113721986 113722017 31 3913
hScc1 BcellGSE12603 113724364 113725053 689 1206
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 113770880 113772072 1192 0
CTCF G2GSE9613 113725606 113726441 835 0
CTCF G2GSE9613 113766199 113766479 280 0
CTCF G2GSE9613 113788068 113788248 180 0
H3K27me3 colorectalcancer 113726480 113727188 708 0
H3K4me3 colorectalcancer 113726516 113727188 672 0
NRSF JurkatGSE13047 113730500 113731134 634 0
NRSF mAbJurkat 113729682 113731544 1862 0
NRSF mAbJurkat 113732743 113733396 653 0
NRSF-mono JurkatQuESTdata 113730568 113731096 528 0
NRSF-poly JurkatQuESTdata 113730488 113731009 521 0
Oct1 H2O2-HelaGSE14283 113748485 113748514 29 0
Oct1 H2O2-HelaGSE14283 113754993 113755026 33 0
Oct1 HelaGSE14283 113748483 113748515 32 0
hScc1 BcellGSE12603 113725527 113726877 1350 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
21334 mRNA KCNN2 chr5 113725914 113860096 77 mRNA chr5 113811013 114137009Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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