AutismKB 2.0

Annotation Detail for KCNN3


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Basic Information Top
Gene Symbol:KCNN3 ( KCa2.3,SK3,SKCA3,hSK3 )
Gene Full Name: potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
Band: 1q21.3
Quick LinksEntrez ID:3782; OMIM: 602983; Uniprot ID:KCNN3_HUMAN; ENSEMBL ID: ENSG00000143603; HGNC ID: 6292
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
25O-linkedHMM predict
98Phosphoserine(ATM)HMM predict
118O-linkedHMM predict
118Phosphoserine(IKK)HMM predict
120N-linkedHMM predict
133Phosphoserine(IKK)HMM predict
133Phosphoserine(CAMK2)HMM predict
145Phosphoserine(IKK)HMM predict
148O-linkedHMM predict
148O-linkedHMM predict
149O-linkedHMM predict
151O-linkedHMM predict
151O-linkedHMM predict
185Phosphotyrosine(Jak)HMM predict
217Phosphoserine(CDC2)HMM predict
243N-linkedHMM predict
247N-linkedHMM predict
254O-linkedHMM predict
256O-linkedHMM predict
257O-linkedHMM predict
257O-linkedHMM predict
258O-linkedHMM predict
289Phosphoserine(PKA)HMM predict
627Phosphoserine(PKA)HMM predict
712Phosphothreonine(CDC2)HMM predict
715O-linkedHMM predict
717Phosphoserine(CDC2)HMM predict
723O-linkedHMM predict
724O-linkedHMM predict
724O-linkedHMM predict
725O-linkedHMM predict
725O-linkedHMM predict
728O-linkedHMM predict
728O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002249
  • Location:chr1 152946536-153109377
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 153117558 153117891 333 8347
CTCF CD4SISSRdata 153117558 153117891 333 8347
CTCF G2GSE9613 153116963 153117976 1013 8092
Oct1 HelaGSE14283 153118336 153118399 63 8990
hScc1 BcellGSE12603 153109275 153109541 266 31
hScc1 BcellGSE12603 153115638 153115847 209 6365
hScc1 BcellGSE12603 153117441 153117976 535 8331
hScc1 CdLSGSE12603 153117098 153118237 1139 8290
hScc1 G2GSE9613 153117441 153117976 535 8331
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 153102824 153102963 139 0
CTCF CD4SISSRdata 153102824 153102963 139 0
CTCF G2GSE9613 153100369 153100679 310 0
CTCF G2GSE9613 153102676 153103366 690 0
ER E2-MCF7GSE14664 153106695 153106735 40 0
ER E2-MCF7GSE14664 153107435 153107486 51 0
H3K27me3 colorectalcancer 153106877 153108390 1513 0
Oct1 HelaGSE14283 153107442 153107484 42 0
PHF8 293TGSE20725 153108733 153109881 1148 0
TFAP2C MCF7GSE21234 153108546 153108846 300 0
hScc1 BcellGSE12603 153102773 153103438 665 0
hScc1 BcellGSE12603 153103886 153104216 330 0
hScc1 BcellGSE12603 153105639 153106021 382 0
hScc1 CdLSGSE12603 153102482 153103143 661 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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