Annotation Detail for TNPO1
Basic Information Top
| Gene Symbol: | TNPO1 ( IPO2,KPNB2,MIP,MIP1,TRN ) |
|---|---|
| Gene Full Name: | transportin 1 |
| Band: | 5q13.2 |
| Quick Links | Entrez ID:3842; OMIM: 602901; Uniprot ID:TNPO1_HUMAN; ENSEMBL ID: ENSG00000083312; HGNC ID: 6401 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 1 | N-acetylmethionine. | |
| 32 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 22 | Phosphoserine(ATM) | HMM predict |
| 24 | Phosphoserine(IKK) | HMM predict |
| 24 | Phosphoserine(ATM) | HMM predict |
| 66 | Phosphoserine(CK1) | HMM predict |
| 142 | Phosphotyrosine(INSR) | HMM predict |
| 142 | Phosphotyrosine(Syk) | HMM predict |
| 331 | Phosphoserine(CK2) | HMM predict |
| 344 | Phosphothreonine(PKC) | HMM predict |
| 371 | Phosphoserine(CK2) | HMM predict |
| 477 | Phosphotyrosine(Syk) | HMM predict |
| 551 | Phosphoserine(ATM) | HMM predict |
| 561 | Phosphotyrosine(INSR) | HMM predict |
| 561 | Phosphotyrosine(EGFR) | HMM predict |
| 633 | Phosphotyrosine(SRC) | HMM predict |
| 633 | Phosphotyrosine(Syk) | HMM predict |
| 727 | N-linked | HMM predict |
| 763 | Phosphothreonine(MAPK) | HMM predict |
| 780 | Phosphotyrosine(INSR) | HMM predict |
| 780 | Phosphotyrosine(Jak) | HMM predict |
| 824 | N-linked | HMM predict |
| 872 | Phenylalanine | HMM predict |
| 873 | Phosphoserine(PKA) | HMM predict |
| 873 | Phenylalanine | HMM predict |
- RefSeq ID: NM_002270
- Location:chr5 72148253-72240528
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 72147865 | 72148588 | 723 | 27 |
| hScc1 | Bcell | GSE12603 | 72147651 | 72148485 | 834 | 186 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 72150660 | 72150820 | 160 | 0 |
| CTCF | CD4 | SISSRdata | 72150660 | 72150820 | 160 | 0 |
| CTCF | G2 | GSE9613 | 72150371 | 72150570 | 199 | 0 |
| CTCF | G2 | GSE9613 | 72150937 | 72151185 | 248 | 0 |
| ER | MCF7 | GSE19013 | 72167140 | 72168087 | 947 | 0 |
| Fos | K562 | GSE19551 | 72179360 | 72179994 | 634 | 0 |
| H3K4me3 | colorectal | cancer | 72149083 | 72149539 | 456 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 72147441 | 72149189 | 1748 | 0 |
| hScc1 | Bcell | GSE12603 | 72150406 | 72150570 | 164 | 0 |
| hScc1 | CdLS | GSE12603 | 72150371 | 72150570 | 199 | 0 |
| p130 | Senescent | GSE19898 | 72148221 | 72148435 | 214 | 0 |
| p130 | shRbQuiescent | GSE19898 | 72148232 | 72149026 | 794 | 0 |
| p130 | shRbSenescent | GSE19898 | 72147723 | 72149093 | 1370 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-miR-146a | hsa-mir-146a | 5 | 20542134 |
| hsa-miR-146a | hsa-mir-146a | 5 | 20542134 |
| hsa-miR-146a* | hsa-mir-146a | 5 | 20542134 |
| hsa-miR-146a* | hsa-mir-146a | 5 | 20542134 |
| hsa-miR-192 | hsa-mir-192 | 11 | 18835392 |
| hsa-miR-192 | hsa-mir-192 | 11 | 18835392 |
| hsa-miR-192* | hsa-mir-192 | 11 | 18835392 |
| hsa-miR-192* | hsa-mir-192 | 11 | 18835392 |
| hsa-miR-21 | hsa-mir-21 | 17 | 17640343 |
| hsa-miR-21 | hsa-mir-21 | 17 | 17640343 |
| hsa-miR-21* | hsa-mir-21 | 17 | 17640343 |
| hsa-miR-21* | hsa-mir-21 | 17 | 17640343 |
| hsa-miR-210 | hsa-mir-210 | 11 | 19826008 |
| hsa-miR-210 | hsa-mir-210 | 11 | 19826008 |
| No data |
Cis-Nats regulation