AutismKB 2.0

Annotation Detail for KRT7


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Basic Information Top
Gene Symbol:KRT7 ( CK7,K2C7,K7,MGC129731,MGC3625,SCL )
Gene Full Name: keratin 7
Band: 12q13.13
Quick LinksEntrez ID:3855; OMIM: 148059; Uniprot ID:K2C7_HUMAN; ENSEMBL ID: ENSG00000135480; HGNC ID: 6445
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylserine.
7Phosphoserine.
14Phosphoserine (By similarity).
20Dimethylated arginine; alternate.
20Omega-N-methylarginine; alternate.
36Phosphoserine.
38Phosphoserine.
40Phosphotyrosine.
45Phosphoserine.
53Phosphoserine.
55Phosphotyrosine.
199N6-acetyllysine.
205Phosphotyrosine.
252Phosphoserine.
254Phosphoserine.
296N6-acetyllysine.
375Phosphotyrosine.
380Phosphoserine.
Location(AA) Modifications Resource
14Phosphoserine (By similarity).Swiss-Prot 53.0
20Omega-N-methylated arginine.Swiss-Prot 53.0
254Phosphoserine.Swiss-Prot 53.0
Location(AA) Modification Resource
11Phosphothreonine(PKC)HMM predict
27Phosphoserine(CDC2)HMM predict
40Phosphotyrosine(INSR)HMM predict
135Phosphoserine(PKG)HMM predict
229N-linkedHMM predict
417N-linkedHMM predict
461Phosphoserine(CAMK2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005556
  • Location:chr12 50913220-50928975
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 50910217 50911018 801 2603
CTCF CD4GSE12889 50893542 50893825 283 19537
CTCF CD4SISSRdata 50893542 50893825 283 19537
CTCF JurkatGSE12889 50893653 50893921 268 19434
CTCF G2GSE9613 50893066 50894957 1891 19209
CTCF G2GSE9613 50897284 50897432 148 15863
CTCF G2GSE9613 50899648 50899869 221 13462
CTCF G2GSE9613 50901921 50902106 185 11207
CTCF G2GSE9613 50905822 50906102 280 7259
CTCF G2GSE9613 50909241 50909768 527 3716
CTCF G2GSE9613 50910976 50911774 798 1846
CTCF G2GSE9613 50912233 50913789 1556 210
FOXA1 MCF7GSE15244 50893861 50894363 502 19109
FOXA1 MCF7GSE15244 50895667 50896292 625 17241
FOXA1 MCF7GSE15244 50908378 50908779 401 4642
FOXA1 MCF7GSE15244 50909377 50910124 747 3470
FOXA1 MCF7GSE15244 50910711 50912307 1596 1712
FoxA1 MCF7MACSdata 50895816 50896066 250 17280
GATA3 MCF7GSE15244 50895667 50896963 1296 16906
GATA3 MCF7GSE15244 50910785 50912307 1522 1675
NRSF JurkatGSE13047 50896019 50896966 947 16728
NRSF JurkatSISSRdata 50896096 50896583 487 16881
NRSF-mono JurkatQuESTdata 50896049 50896582 533 16905
NRSF-poly JurkatQuESTdata 50895968 50896728 760 16873
P300 T30-glioblastomaGSE21026 50895244 50896333 1089 17432
RARA MCF7GSE15244 50893788 50894957 1169 18848
RARA MCF7GSE15244 50895667 50897642 1975 16566
RARA MCF7GSE15244 50901562 50902106 544 11387
RARA MCF7GSE15244 50908378 50908779 401 4642
RARA MCF7GSE15244 50909093 50910160 1067 3594
RARA MCF7GSE15244 50910617 50912156 1539 1834
RARG MCF7GSE15244 50893788 50894331 543 19161
RARG MCF7GSE15244 50895667 50897642 1975 16566
RARG MCF7GSE15244 50901774 50902106 332 11281
RARG MCF7GSE15244 50909093 50910160 1067 3594
RARG MCF7GSE15244 50910684 50912307 1623 1725
Rb shRbSenescenceGSE19898 50905851 50906107 256 7242
TFAP2C MCF7GSE21234 50893250 50894325 1075 19433
TFAP2C MCF7GSE21234 50895372 50896435 1063 17317
TFAP2C MCF7GSE21234 50897175 50897711 536 15778
hScc1 BcellGSE12603 50893455 50893861 406 19563
hScc1 G2GSE9613 50893173 50894957 1784 19156
hScc1 G2GSE9613 50912485 50913789 1304 84
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 50929457 50930848 1391 1177
CTCF G2GSE9613 50932037 50932548 511 3317
CTCF G2GSE9613 50933692 50933941 249 4841
CTCF G2GSE9613 50936219 50936464 245 7366
CTCF G2GSE9613 50937385 50937567 182 8501
CTCF G2GSE9613 50938433 50939699 1266 10091
CTCF G2GSE9613 50941706 50941861 155 12808
FOXA1 MCF7GSE15244 50929420 50930332 912 901
FOXA1 MCF7GSE15244 50933522 50933982 460 4777
RARG MCF7GSE15244 50929354 50929612 258 508
RARG MCF7GSE15244 50932037 50932219 182 3153
STAT1 HeLaGSE12783 50938691 50943489 4798 12115
hScc1 BcellGSE12603 50930300 50930713 413 1531
hScc1 CdLSGSE12603 50938504 50938897 393 9725
hScc1 G2GSE9613 50930039 50930643 604 1366
hScc1 G2GSE9613 50938504 50939360 856 9957
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 50914201 50914473 272 0
CTCF G2GSE9613 50915905 50916573 668 0
CTCF G2GSE9613 50917319 50917689 370 0
CTCF G2GSE9613 50918603 50918904 301 0
CTCF G2GSE9613 50921506 50921787 281 0
CTCF G2GSE9613 50922468 50922983 515 0
CTCF G2GSE9613 50924073 50924839 766 0
CTCF G2GSE9613 50925391 50925752 361 0
CTCF G2GSE9613 50927415 50928130 715 0
CTCF G2GSE9613 50928646 50928959 313 0
FOXA1 DLD1GSE12801 50915980 50916573 593 0
FOXA1 DLD1GSE12801 50923915 50924525 610 0
FOXA1 DLD1GSE12801 50927177 50927836 659 0
FOXA1 MCF7GSE15244 50915027 50915568 541 0
FOXA1 MCF7GSE15244 50915905 50916804 899 0
FOXA1 MCF7GSE15244 50918051 50918294 243 0
FOXA1 MCF7GSE15244 50923465 50924671 1206 0
FOXA1 MCF7GSE15244 50925391 50926422 1031 0
FOXA1 MCF7GSE15244 50926857 50928065 1208 0
FoxA1 MCF7MACSdata 50915949 50916463 514 0
FoxA1 MCF7MACSdata 50927411 50927744 333 0
NFkBII GM12878GSE19485 50923583 50924990 1407 0
NRSF pAbJurkat 50913528 50914806 1278 0
P300 T30-glioblastomaGSE21026 50923176 50924978 1802 0
RARA MCF7GSE15244 50915711 50916711 1000 0
RARA MCF7GSE15244 50923101 50924707 1606 0
RARA MCF7GSE15244 50925391 50926387 996 0
RARA MCF7GSE15244 50926791 50927836 1045 0
RARG MCF7GSE15244 50915057 50916711 1654 0
RARG MCF7GSE15244 50918051 50918349 298 0
RARG MCF7GSE15244 50923061 50924769 1708 0
RARG MCF7GSE15244 50925322 50926387 1065 0
RARG MCF7GSE15244 50926857 50928065 1208 0
TAF HelaGSE8489 50918051 50918294 243 0
TFAP2C MCF7GSE21234 50915891 50916746 855 0
TFAP2C MCF7GSE21234 50923168 50924963 1795 0
TFAP2C MCF7GSE21234 50926801 50928708 1907 0
hScc1 BcellGSE12603 50913287 50913862 575 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-125b hsa-mir-125b-1 11 19378336
hsa-miR-125b hsa-mir-125b-2 21 19378336
hsa-miR-133a hsa-mir-133a-1 18 19378336
hsa-miR-133a hsa-mir-133a-2 20 19378336
hsa-miR-133b hsa-mir-133b 6 19378336
hsa-miR-145 hsa-mir-145 5 19378336
hsa-miR-145* hsa-mir-145 5 19378336
hsa-miR-195 hsa-mir-195 17 19378336
hsa-miR-195* hsa-mir-195 17 19378336
hsa-miR-30a hsa-mir-30a 6 19378336
hsa-miR-30a* hsa-mir-30a 6 19378336
No data
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
6029 mRNA KRT7 chr12 50913220 50928976 221 mRNA KRT7 chr12 50925098 50927499Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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