AutismKB 2.0

Annotation Detail for KRT85


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Basic Information Top
Gene Symbol:KRT85 ( HB5,Hb-5,KRTHB5,hHb5 )
Gene Full Name: keratin 85
Band: 12q13.13
Quick LinksEntrez ID:3891; OMIM: 602767; Uniprot ID:KRT85_HUMAN; ENSEMBL ID: ENSG00000135443; HGNC ID: 6462
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
17N-linkedHMM predict
83MethylarginineHMM predict
97O-linkedHMM predict
106Phosphothreonine(MAPK)HMM predict
178Phosphothreonine(PKC)HMM predict
462Phosphothreonine(CDC2)HMM predict
462Phosphothreonine(MAPK)HMM predict
499GlycineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002283
  • Location:chr12 51040058-51047575
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 51050962 51051322 360 3567
ER MCF7GSE19013 51051717 51052447 730 4507
hScc1 BcellGSE12603 51052423 51052976 553 5124
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 51028133 51028389 256 11798
CTCF G2GSE9613 51030828 51031296 468 8997
CTCF G2GSE9613 51031850 51032101 251 8083
CTCF G2GSE9613 51036563 51036706 143 3424
CTCF G2GSE9613 51039744 51040224 480 75
ER MCF7GSE19013 51024316 51025443 1127 15179
FOXA1 MCF7GSE15244 51024361 51025289 928 15234
FOXA1 MCF7GSE15244 51025640 51025830 190 14324
FOXA1 MCF7GSE15244 51028354 51028645 291 11559
FoxA1 MCF7MACSdata 51024744 51025103 359 15135
Oct1 H2O2-HelaGSE14283 51038770 51038809 39 1269
Oct1 HelaGSE14283 51027098 51027139 41 12940
Oct1 HelaGSE14283 51038761 51038809 48 1274
RARA MCF7GSE15244 51024289 51025289 1000 15270
RARG MCF7GSE15244 51024361 51025289 928 15234
Rb shRbQuiescentGSE19898 51039776 51040030 254 156
hScc1 G2GSE9613 51036563 51036785 222 3385
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 51041567 51042948 1381 0
CTCF G2GSE9613 51045141 51045324 183 0
CTCF G2GSE9613 51046942 51047449 507 0
FOXA1 MCF7GSE15244 51039894 51040703 809 0
hScc1 BcellGSE12603 51042197 51042477 280 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7b hsa-let-7b 22 18668040
hsa-let-7b* hsa-let-7b 22 18668040
hsa-miR-1 hsa-mir-1-2 18 18668040
hsa-miR-1 hsa-mir-1-1 20 18668040
hsa-miR-155 hsa-mir-155 21 18668040
hsa-miR-155* hsa-mir-155 21 18668040
hsa-miR-16 hsa-mir-16-1 13 18668040
hsa-miR-16 hsa-mir-16-2 3 18668040
hsa-miR-30a hsa-mir-30a 6 18668040
hsa-miR-30a* hsa-mir-30a 6 18668040
hsa-miR-30b hsa-mir-30b 8 18668040
hsa-miR-30b* hsa-mir-30b 8 18668040
hsa-miR-30c hsa-mir-30c-2 6 18668040
hsa-miR-30c hsa-mir-30c-1 1 18668040
hsa-miR-30c-1* hsa-mir-30c-1 1 18668040
hsa-miR-30c-2* hsa-mir-30c-2 6 18668040
hsa-miR-30d hsa-mir-30d 8 18668040
hsa-miR-30d* hsa-mir-30d 8 18668040
hsa-miR-30e hsa-mir-30e 1 18668040
hsa-miR-30e* hsa-mir-30e 1 18668040
ID in Tarbase Data Type Support Type miRNA Gene Direct Support Publication
1241 Unknown pSILAC miR-30 KRTHB5 down 50-25% 18668040
Ensembl Protein Type Differentially expressed in Pathology or Event Mis Regulation Gene Expression Tumour Involvement
ENSG00000135443 n_a n_a n_a n_a malignant tumour
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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