AutismKB 2.0

Annotation Detail for LCN15


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Basic Information Top
Gene Symbol:LCN15 ( PRO6093,UNQ2541 )
Gene Full Name: lipocalin 15
Band: 9q34.3
Quick LinksEntrez ID:389812; OMIM: NA; Uniprot ID:LCN15_HUMAN; ENSEMBL ID: ENSG00000177984; HGNC ID: 33777
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_203347
  • Location:chr9 138773907-138778785
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 138784315 138784466 151 5605
CTCF CD4SISSRdata 138784315 138784466 151 5605
CTCF HelaGSE12889 138784220 138784480 260 5565
CTCF JurkatGSE12889 138784188 138784472 284 5545
ETS1 JurkatGSE17954 138787770 138788430 660 9315
Fos K562GSE19551 138787914 138788327 413 9335
Myc K562GSE19551 138784281 138784489 208 5600
TFAP2C MCF7GSE21234 138788724 138789408 684 10281
TFAP2C MCF7GSE21234 138791706 138792215 509 13175
USF1 HepG2E 138786163 138786488 325 7540
USF1 HepG2E 138787840 138788076 236 9173
USF1 HepG2E 138788500 138789699 1199 10314
USF2 HepG2E 138787840 138788076 236 9173
USF2 HepG2E 138788500 138789664 1164 10297
hScc1 BcellGSE12603 138783988 138784421 433 5419
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 138775078 138775554 476 0
hScc1 BcellGSE12603 138776081 138776872 791 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018