AutismKB 2.0

Annotation Detail for LAMA5


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Basic Information Top
Gene Symbol:LAMA5 ( KIAA1907 )
Gene Full Name: laminin, alpha 5
Band: 20q13.33
Quick LinksEntrez ID:3911; OMIM: 601033; Uniprot ID:LAMA5_HUMAN; ENSEMBL ID: ENSG00000130702; HGNC ID: 6485
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
95N-linked (GlcNAc...) (Potential).
143N-linked (GlcNAc...) (Potential).
181Phosphothreonine.
182Phosphotyrosine.
243N-linked (GlcNAc...) (Potential).
452N-linked (GlcNAc...) (Potential).
479N-linked (GlcNAc...) (Potential).
900N-linked (GlcNAc...) (Potential).
921N-linked (GlcNAc...) (Potential).
959N-linked (GlcNAc...) (Potential).
1330N-linked (GlcNAc...) (Potential).
1529N-linked (GlcNAc...) (Potential).
1555N-linked (GlcNAc...) (Potential).
1724Cell attachment site (Potential).
1840Cell attachment site (Potential).
2196N-linked (GlcNAc...) (Potential).
2209N-linked (GlcNAc...).
2303N-linked (GlcNAc...).
2423N-linked (GlcNAc...).
2501N-linked (GlcNAc...).
2568N-linked (GlcNAc...).
2707N-linked (GlcNAc...).
3107N-linked (GlcNAc...).
3209N-linked (GlcNAc...) (Potential).
3257N-linked (GlcNAc...) (Potential).
3287N-linked (GlcNAc...) (Potential).
3626N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
95N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
143N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
243N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
452N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
479N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
900N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
921N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
959N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
1330N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
1529N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
1555N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
2196N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
2209N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
2303N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
2423N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
2501N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
2568N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
2707N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
3107N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
3209N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
3257N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
3287N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
3626N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
73Phosphoserine(CDC2)HMM predict
81Phosphotyrosine(Jak)HMM predict
95N-linkedHMM predict
143N-linkedHMM predict
164Phosphoserine(CDC2)HMM predict
190Phosphoserine(CDK)HMM predict
203Phosphothreonine(PKC)HMM predict
243N-linkedHMM predict
284O-linkedHMM predict
324S-palmitoylHMM predict
336S-palmitoylHMM predict
337S-palmitoylHMM predict
369Phosphotyrosine(Syk)HMM predict
370SulfotyrosineHMM predict
380Phosphoserine(PKG)HMM predict
380Phosphoserine(CAMK2)HMM predict
380Phosphoserine(IKK)HMM predict
380Phosphoserine(PKA)HMM predict
382Phosphoserine(IKK)HMM predict
415Phosphoserine(ATM)HMM predict
447S-palmitoylHMM predict
452N-linkedHMM predict
470O-linkedHMM predict
474O-linkedHMM predict
474Phosphothreonine(MAPK)HMM predict
474Phosphothreonine(CDK)HMM predict
476O-linkedHMM predict
479N-linkedHMM predict
538S-palmitoylHMM predict
594Phosphothreonine(PKC)HMM predict
652S-palmitoylHMM predict
744S-palmitoylHMM predict
766Phosphoserine(CDC2)HMM predict
768Phosphoserine(ATM)HMM predict
883Phosphothreonine(CDC2)HMM predict
900N-linkedHMM predict
921N-linkedHMM predict
924Phosphoserine(MAPK)HMM predict
943O-linkedHMM predict
947Phosphoserine(PKG)HMM predict
959N-linkedHMM predict
964O-linkedHMM predict
1017Phosphotyrosine(Syk)HMM predict
1018Phosphotyrosine(Syk)HMM predict
1040Phosphoserine(IKK)HMM predict
1081O-linkedHMM predict
1081Phosphoserine(ATM)HMM predict
1081PhosphoserineHMM predict
1089O-linkedHMM predict
1130Phosphothreonine(MAPK)HMM predict
1130Phosphothreonine(CDK)HMM predict
1158Phosphothreonine(PKA)HMM predict
1158Phosphothreonine(PKC)HMM predict
1208Phosphoserine(CK1)HMM predict
1255O-linkedHMM predict
1255Phosphothreonine(MAPK)HMM predict
1259O-linkedHMM predict
1259Phosphoserine(CDC2)HMM predict
1286Phosphothreonine(PKC)HMM predict
1330N-linkedHMM predict
1384Phosphotyrosine(SRC)HMM predict
1412Phosphoserine(ATM)HMM predict
1529N-linkedHMM predict
1555N-linkedHMM predict
1753Phosphothreonine(MAPK)HMM predict
1753Phosphothreonine(CDK)HMM predict
1777Phosphothreonine(PKC)HMM predict
1817Phosphoserine(CDC2)HMM predict
1817Phosphoserine(MAPK)HMM predict
1969S-palmitoylHMM predict
2019N-linkedHMM predict
2064S-palmitoylHMM predict
2067S-palmitoylHMM predict
2070S-palmitoylHMM predict
2117S-palmitoylHMM predict
2138O-linkedHMM predict
2196N-linkedHMM predict
2221Phosphoserine(CDC2)HMM predict
2221Phosphoserine(IKK)HMM predict
2294Phosphoserine(CK1)HMM predict
2303N-linkedHMM predict
2308Phosphoserine(CK1)HMM predict
2357Phosphoserine(CK1)HMM predict
2423N-linkedHMM predict
2466Phosphothreonine(MAPK)HMM predict
2466Phosphothreonine(CDK)HMM predict
2476Phosphoserine(CDC2)HMM predict
2476Phosphoserine(CDK)HMM predict
2515Phosphothreonine(PKC)HMM predict
2568N-linkedHMM predict
2648Phosphoserine(CAMK2)HMM predict
2685Phosphothreonine(PKC)HMM predict
2698Phosphoserine(PKG)HMM predict
2749Phosphothreonine(MAPK)HMM predict
2794Phosphotyrosine(INSR)HMM predict
2883O-linkedHMM predict
2884O-linkedHMM predict
2934Phosphoserine(IKK)HMM predict
2958O-linkedHMM predict
2974Phosphoserine(CAMK2)HMM predict
3107N-linkedHMM predict
3167Phosphoserine(CDK)HMM predict
3209N-linkedHMM predict
3257N-linkedHMM predict
3448Phosphoserine(IKK)HMM predict
3476O-linkedHMM predict
3478Phosphoserine(CK1)HMM predict
3479O-linkedHMM predict
3490S-palmitoylHMM predict
3566Phosphothreonine(MAPK)HMM predict
3626N-linkedHMM predict
3673Phosphoserine(CDC2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005560
  • Location:chr20 60317517-60375762
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 60384707 60385032 325 9107
H3K27me3 colorectalcancer 60381808 60382360 552 6322
H3ac HepG2E 60381808 60382431 623 6357
SRF HelaGSE8489 60381808 60382323 515 6303
TAF HelaGSE8489 60381808 60382277 469 6280
TFAP2C MCF7GSE21234 60376348 60378992 2644 1908
TFAP2C MCF7GSE21234 60379223 60380117 894 3908
hScc1 BcellGSE12603 60375134 60376738 1604 174
hScc1 BcellGSE12603 60377288 60377679 391 1721
hScc1 BcellGSE12603 60379223 60379925 702 3812
hScc1 BcellGSE12603 60381092 60381357 265 5462
hScc1 BcellGSE12603 60384116 60384367 251 8479
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 60353045 60353619 574 0
CTCF JurkatGSE12889 60335743 60335873 130 0
CTCF G2GSE9613 60319224 60319754 530 0
CTCF G2GSE9613 60333256 60333869 613 0
CTCF G2GSE9613 60339897 60340187 290 0
CTCF G2GSE9613 60345227 60346202 975 0
CTCF G2GSE9613 60346489 60346860 371 0
CTCF G2GSE9613 60368173 60368740 567 0
P300 T0-glioblastomaGSE21026 60353145 60353615 470 0
P300 T30-glioblastomaGSE21026 60352948 60353668 720 0
TFAP2C MCF7GSE21234 60358129 60359700 1571 0
TFAP2C MCF7GSE21234 60362485 60363016 531 0
TFAP2C MCF7GSE21234 60365507 60366360 853 0
TFAP2C MCF7GSE21234 60367696 60368192 496 0
TFAP2C MCF7GSE21234 60370921 60372295 1374 0
TFAP2C MCF7GSE21234 60373996 60375184 1188 0
VDR GM10861-stimGSE22484 60345642 60347294 1652 0
hScc1 BcellGSE12603 60318689 60319438 749 0
hScc1 BcellGSE12603 60321751 60322130 379 0
hScc1 BcellGSE12603 60323930 60324066 136 0
hScc1 BcellGSE12603 60327045 60327637 592 0
hScc1 BcellGSE12603 60330791 60331326 535 0
hScc1 BcellGSE12603 60331843 60333288 1445 0
hScc1 BcellGSE12603 60334853 60335885 1032 0
hScc1 BcellGSE12603 60336362 60337562 1200 0
hScc1 BcellGSE12603 60339509 60340187 678 0
hScc1 BcellGSE12603 60341020 60341987 967 0
hScc1 BcellGSE12603 60342838 60343269 431 0
hScc1 BcellGSE12603 60343726 60346967 3241 0
hScc1 BcellGSE12603 60348285 60348699 414 0
hScc1 BcellGSE12603 60354222 60355088 866 0
hScc1 BcellGSE12603 60360172 60361483 1311 0
hScc1 BcellGSE12603 60361938 60363788 1850 0
hScc1 BcellGSE12603 60364836 60365242 406 0
hScc1 BcellGSE12603 60366159 60367304 1145 0
hScc1 BcellGSE12603 60368130 60368619 489 0
hScc1 BcellGSE12603 60369695 60370396 701 0
hScc1 BcellGSE12603 60372874 60373288 414 0
p63 keratinocytesGSE17611 60358249 60359630 1381 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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