Annotation Detail for LAMB1
Basic Information Top
| Gene Symbol: | LAMB1 ( CLM,MGC142015 ) |
|---|---|
| Gene Full Name: | laminin, beta 1 |
| Band: | 7q31.1 |
| Quick Links | Entrez ID:3912; OMIM: 150240; Uniprot ID:LAMB1_HUMAN; ENSEMBL ID: ENSG00000091136; HGNC ID: 6486 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 120 | N-linked (GlcNAc...) (Potential). | |
| 356 | N-linked (GlcNAc...) (Potential). | |
| 519 | N-linked (GlcNAc...) (Potential). | |
| 677 | N-linked (GlcNAc...) (Potential). | |
| 1041 | N-linked (GlcNAc...) (Potential). | |
| 1195 | N-linked (GlcNAc...) (Potential). | |
| 1279 | N-linked (GlcNAc...). | |
| 1336 | N-linked (GlcNAc...) (Potential). | |
| 1343 | N-linked (GlcNAc...) (Potential). | |
| 1487 | N-linked (GlcNAc...) (Potential). | |
| 1542 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 120 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 356 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 519 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 677 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 1041 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 1195 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 1279 | N-linked (GlcNAc...). | Swiss-Prot 53.0 |
| 1336 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 1343 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 1487 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 1542 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 51 | Phosphoserine(IKK) | HMM predict |
| 85 | Phosphotyrosine(Syk) | HMM predict |
| 120 | N-linked | HMM predict |
| 195 | Phosphoserine(CK1) | HMM predict |
| 259 | Phosphotyrosine(Syk) | HMM predict |
| 356 | N-linked | HMM predict |
| 405 | Phosphoserine(ATM) | HMM predict |
| 474 | Phosphoserine(CK1) | HMM predict |
| 519 | N-linked | HMM predict |
| 520 | N-linked | HMM predict |
| 640 | O-linked | HMM predict |
| 658 | Phosphoserine(CDC2) | HMM predict |
| 677 | N-linked | HMM predict |
| 692 | Phosphoserine(CK2) | HMM predict |
| 737 | Phosphotyrosine(EGFR) | HMM predict |
| 752 | Phosphothreonine(PKA) | HMM predict |
| 783 | Phosphoserine(IKK) | HMM predict |
| 864 | S-palmitoyl | HMM predict |
| 965 | N-linked | HMM predict |
| 1041 | N-linked | HMM predict |
| 1195 | N-linked | HMM predict |
| 1210 | O-linked | HMM predict |
| 1219 | Phosphothreonine(PKC) | HMM predict |
| 1228 | Phosphoserine(PKG) | HMM predict |
| 1228 | Phosphoserine(CAMK2) | HMM predict |
| 1272 | Phosphoserine(PKG) | HMM predict |
| 1276 | Phosphoserine(CK1) | HMM predict |
| 1276 | Phosphoserine(IKK) | HMM predict |
| 1276 | O-linked | HMM predict |
| 1276 | Phosphoserine(ATM) | HMM predict |
| 1279 | N-linked | HMM predict |
| 1290 | Phosphothreonine(PKC) | HMM predict |
| 1336 | N-linked | HMM predict |
| 1343 | N-linked | HMM predict |
| 1487 | N-linked | HMM predict |
| 1520 | Phosphoserine(CK1) | HMM predict |
| 1542 | N-linked | HMM predict |
| 1553 | Phosphoserine(CK1) | HMM predict |
| 1555 | Phosphoserine(CK1) | HMM predict |
| 1632 | Phosphoserine(CK2) | HMM predict |
| 1671 | Phosphotyrosine(EGFR) | HMM predict |
| 1682 | Phosphoserine(PKG) | HMM predict |
| 1698 | Phosphotyrosine(Syk) | HMM predict |
| 1753 | Phosphotyrosine(Syk) | HMM predict |
| 1775 | Isoleucine | HMM predict |
- RefSeq ID: NM_002291
- Location:chr7 107351498-107431039
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3ac | HepG2 | E | 107431166 | 107432804 | 1638 | 946 |
| p130 | Quiescent | GSE19898 | 107435012 | 107435260 | 248 | 4097 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FoxA1 | MCF7 | MACSdata | 107350627 | 107350746 | 119 | 812 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 107359935 | 107360087 | 152 | 0 |
| CTCF | G2 | GSE9613 | 107429374 | 107430976 | 1602 | 0 |
| FOXA1 | MCF7 | GSE15244 | 107376571 | 107377569 | 998 | 0 |
| FOXA1 | MCF7 | GSE15244 | 107379144 | 107380719 | 1575 | 0 |
| FOXA1 | MCF7 | GSE15244 | 107394239 | 107395742 | 1503 | 0 |
| FoxA1 | MCF7 | MACSdata | 107395171 | 107395409 | 238 | 0 |
| Nanog | ES | GSE20650 | 107387150 | 107387596 | 446 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 107384826 | 107384867 | 41 | 0 |
| Oct1 | Hela | GSE14283 | 107384703 | 107384737 | 34 | 0 |
| Oct1 | Hela | GSE14283 | 107384833 | 107384866 | 33 | 0 |
| Oct1 | Hela | GSE14283 | 107395584 | 107395688 | 104 | 0 |
| RARA | MCF7 | GSE15244 | 107376517 | 107377569 | 1052 | 0 |
| RARA | MCF7 | GSE15244 | 107379113 | 107380719 | 1606 | 0 |
| RARA | MCF7 | GSE15244 | 107422770 | 107424781 | 2011 | 0 |
| Rb | Growing | GSE19898 | 107410880 | 107411094 | 214 | 0 |
| Rb | Growing | GSE19898 | 107430720 | 107430935 | 215 | 0 |
| STAT1 | HeLa | GSE12783 | 107422662 | 107424225 | 1563 | 0 |
| Stat6 | IL-4-hr4 | GSE17850 | 107429006 | 107429586 | 580 | 0 |
| TFAP2C | MCF7 | GSE21234 | 107376774 | 107377603 | 829 | 0 |
| TFAP2C | MCF7 | GSE21234 | 107379504 | 107379980 | 476 | 0 |
| TFAP2C | MCF7 | GSE21234 | 107380127 | 107380869 | 742 | 0 |
| TFAP2C | MCF7 | GSE21234 | 107390522 | 107390955 | 433 | 0 |
| hScc1 | G2 | GSE9613 | 107429339 | 107431475 | 2136 | 0 |
| p130 | Quiescent | GSE19898 | 107430545 | 107430817 | 272 | 0 |
| p130 | Senescent | GSE19898 | 107399698 | 107400132 | 434 | 0 |
| p130 | Senescent | GSE19898 | 107429687 | 107430101 | 414 | 0 |
| p130 | shRbQuiescent | GSE19898 | 107403987 | 107404436 | 449 | 0 |
| p130 | shRbSenescent | GSE19898 | 107430678 | 107430934 | 256 | 0 |
| p63 | keratinocytes | GSE17611 | 107365153 | 107365898 | 745 | 0 |
| p63 | keratinocytes | GSE17611 | 107400500 | 107401290 | 790 | 0 |
Validated miRNA targets