AutismKB 2.0

Annotation Detail for LAMB3


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Basic Information Top
Gene Symbol:LAMB3 ( BM600-125KDA,FLJ99565,LAM5,LAMNB1 )
Gene Full Name: laminin, beta 3
Band: 1q32.2
Quick LinksEntrez ID:3914; OMIM: 150310; Uniprot ID:LAMB3_HUMAN; ENSEMBL ID: ENSG00000196878; HGNC ID: 6490
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
220N-linked (GlcNAc...) (Potential).
604N-linked (GlcNAc...) (Potential).
810N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
220N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
604N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
810N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
154O-linkedHMM predict
167Phosphoserine(IKK)HMM predict
205Phosphoserine(IKK)HMM predict
220N-linkedHMM predict
232Phosphotyrosine(Syk)HMM predict
238Phosphotyrosine(Syk)HMM predict
266O-linkedHMM predict
270O-linkedHMM predict
422Phosphotyrosine(INSR)HMM predict
524Phosphotyrosine(Syk)HMM predict
604N-linkedHMM predict
640Phosphoserine(CDC2)HMM predict
640Phosphoserine(CDK)HMM predict
677Phosphoserine(CK1)HMM predict
810N-linkedHMM predict
861Phosphoserine(ATM)HMM predict
861Phosphoserine(CK1)HMM predict
879Phosphoserine(ATM)HMM predict
1030Phosphothreonine(PKC)HMM predict
1110Phosphothreonine(CK2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_000228
  • Location:chr1 207854840-207892442
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 207896964 207897883 919 4981
CTCF G2GSE9613 207894417 207894706 289 2119
P300 T30-glioblastomaGSE21026 207896885 207897844 959 4922
TFAP2C MCF7GSE21234 207892959 207893515 556 795
VDR GM10855-stimGSE22484 207899361 207901220 1859 7848
VDR GM10861-stimGSE22484 207899347 207901400 2053 7931
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 207891117 207891719 602 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-218 hsa-mir-218-1 4 20163849
hsa-miR-218 hsa-mir-218-2 5 20163849
hsa-miR-218 hsa-mir-218-1 4 17998940
hsa-miR-218 hsa-mir-218-2 5 17998940
hsa-miR-802 hsa-mir-802 21 18952845
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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