AutismKB 2.0

Annotation Detail for LAMP2


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Basic Information Top
Gene Symbol:LAMP2 ( CD107b,LAMPB,LGP110 )
Gene Full Name: lysosomal-associated membrane protein 2
Band: Xq24
Quick LinksEntrez ID:3920; OMIM: 309060; Uniprot ID:LAMP2_HUMAN; ENSEMBL ID: ENSG00000005893; HGNC ID: 6501
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
32N-linked (GlcNAc...)
38N-linked (GlcNAc...)
49N-linked (GlcNAc...).
58N-linked (GlcNAc...).
75N-linked (GlcNAc...).
101N-linked (GlcNAc...).
123N-linked (GlcNAc...).
179N-linked (GlcNAc...).
195O-linked (GalNAc...).
196O-linked (GalNAc...).
200O-linked (GalNAc...).
203O-linked (GalNAc...).
204O-linked (GalNAc...).
207O-linked (GalNAc...); partial.
209O-linked (GalNAc...); partial.
210O-linked (GalNAc...).
211O-linked (GalNAc...).
213O-linked (GalNAc...); partial.
229N-linked (GlcNAc...).
242N-linked (GlcNAc...).
257N-linked (GlcNAc...).
275N-linked (GlcNAc...).
300N-linked (GlcNAc...).
307N-linked (GlcNAc...)
317N-linked (GlcNAc...).
356N-linked (GlcNAc...).
Location(AA) Modifications Resource
32N-linked (GlcNAc...)(polylactosaminoglycan).Swiss-Prot 53.0
38N-linked (GlcNAc...)(polylactosaminoglycan).Swiss-Prot 53.0
49N-linked (GlcNAc...).Swiss-Prot 53.0
58N-linked (GlcNAc...).Swiss-Prot 53.0
75N-linked (GlcNAc...).Swiss-Prot 53.0
101N-linked (GlcNAc...).Swiss-Prot 53.0
123N-linked (GlcNAc...).Swiss-Prot 53.0
179N-linked (GlcNAc...).Swiss-Prot 53.0
195O-linked (GalNAc...).Swiss-Prot 53.0
196O-linked (GalNAc...).Swiss-Prot 53.0
200O-linked (GalNAc...).Swiss-Prot 53.0
203O-linked (GalNAc...).Swiss-Prot 53.0
204O-linked (GalNAc...).Swiss-Prot 53.0
207O-linked (GalNAc...); partial.Swiss-Prot 53.0
209O-linked (GalNAc...); partial.Swiss-Prot 53.0
210O-linked (GalNAc...).Swiss-Prot 53.0
211O-linked (GalNAc...).Swiss-Prot 53.0
213O-linked (GalNAc...); partial.Swiss-Prot 53.0
229N-linked (GlcNAc...).Swiss-Prot 53.0
242N-linked (GlcNAc...).Swiss-Prot 53.0
257N-linked (GlcNAc...).Swiss-Prot 53.0
275N-linked (GlcNAc...).Swiss-Prot 53.0
300N-linked (GlcNAc...).Swiss-Prot 53.0
307N-linked (GlcNAc...)(polylactosaminoglycan).Swiss-Prot 53.0
317N-linked (GlcNAc...).Swiss-Prot 53.0
356N-linked (GlcNAc...).Swiss-Prot 53.0
Location(AA) Modification Resource
32N-linkedHMM predict
38N-linkedHMM predict
49N-linkedHMM predict
56Phosphothreonine(PKC)HMM predict
58N-linkedHMM predict
75N-linkedHMM predict
101N-linkedHMM predict
110Phosphoserine(IKK)HMM predict
123N-linkedHMM predict
136Phosphothreonine(PKC)HMM predict
155Phosphoserine(IKK)HMM predict
179N-linkedHMM predict
185N-linkedHMM predict
196O-linkedHMM predict
203O-linkedHMM predict
207Phosphoserine(CDC2)HMM predict
207O-linkedHMM predict
207O-linkedHMM predict
209O-linkedHMM predict
209O-linkedHMM predict
211O-linkedHMM predict
211Phosphothreonine(MAPK)HMM predict
211O-linkedHMM predict
213Phosphothreonine(MAPK)HMM predict
213Phosphothreonine(CDK)HMM predict
213O-linkedHMM predict
229N-linkedHMM predict
242N-linkedHMM predict
257N-linkedHMM predict
275N-linkedHMM predict
307N-linkedHMM predict
356N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002294
  • Location:chrX 119448708-119487188
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 119445905 119445944 39 2784
Oct1 HelaGSE14283 119445904 119445944 40 2785
No data
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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