AutismKB 2.0

Annotation Detail for LCN9


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Basic Information Top
Gene Symbol:LCN9 ( 9230102I19Rik )
Gene Full Name: lipocalin 9
Band: 9q34.3
Quick LinksEntrez ID:392399; OMIM: 612903; Uniprot ID:LCN9_HUMAN; ENSEMBL ID: ENSG00000148386; HGNC ID: 17442
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
68N-linked (GlcNAc...) (Potential).
129N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
68N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
129N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
68N-linkedHMM predict
99Phosphotyrosine(INSR)HMM predict
129N-linkedHMM predict
182Phosphoserine(CDC2)HMM predict
187ProlineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001001676
  • Location:chr9 137694988-137697575
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 137686903 137687331 428 7872
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 137705654 137706391 737 8447
hScc1 BcellGSE12603 137698214 137698522 308 793
hScc1 BcellGSE12603 137710233 137710893 660 12988
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
hScc1 BcellGSE12603 137697246 137697569 323 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018