AutismKB 2.0

Annotation Detail for STMN1


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Basic Information Top
Gene Symbol:STMN1 ( C1orf215,FLJ32206,LAP18,Lag,MGC138869,MGC138870,OP18,PP17,PP19,PR22,SMN )
Gene Full Name: stathmin 1
Band: 1p36.11
Quick LinksEntrez ID:3925; OMIM: 151442; Uniprot ID:CA215_HUMAN; ENSEMBL ID: ENSG00000117632; HGNC ID: 6510
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
16Phosphoserine(PKA)HMM predict
25Phosphoserine(ATM)HMM predict
25Phosphoserine(CDK)HMM predict
25Phosphoserine(MAPK)HMM predict
25Phosphoserine(CDC2)HMM predict
31Phosphoserine(PKG)HMM predict
38Phosphoserine(CDC2)HMM predict
38Phosphoserine(CDK)HMM predict
38Phosphoserine(ATM)HMM predict
46Phosphoserine(CK1)HMM predict
63Phosphoserine(CK2)HMM predict
63Phosphoserine(PKG)HMM predict
63Phosphoserine(PKA)HMM predict
63PhosphoserineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005563
  • Location:chr1 26099194-26105579
  • strand:-
No data
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Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 26105206 26105861 655 0
hScc1 BcellGSE12603 26104474 26106047 1573 0
p130 shRbSenescentGSE19898 26105379 26105776 397 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7a hsa-let-7a-1 9 12554860
hsa-let-7a hsa-let-7a-2 11 12554860
hsa-let-7a hsa-let-7a-3 22 12554860
hsa-let-7a* hsa-let-7a-1 9 12554860
hsa-let-7a* hsa-let-7a-3 22 12554860
hsa-miR-106a hsa-mir-106a X 12554860
hsa-miR-106a* hsa-mir-106a X 12554860
hsa-miR-124 hsa-mir-124-1 8 12554860
hsa-miR-124 hsa-mir-124-2 8 12554860
hsa-miR-124 hsa-mir-124-3 20 12554860
hsa-miR-124* hsa-mir-124-1 8 12554860
hsa-miR-124* hsa-mir-124-2 8 12554860
hsa-miR-124* hsa-mir-124-3 20 12554860
hsa-miR-126 hsa-mir-126 9 18555017
hsa-miR-126* hsa-mir-126 9 18555017
hsa-miR-15a hsa-mir-15a 13 12554860
hsa-miR-15a* hsa-mir-15a 13 12554860
hsa-miR-15b hsa-mir-15b 3 12554860
hsa-miR-15b* hsa-mir-15b 3 12554860
hsa-miR-17 hsa-mir-17 13 12554860
hsa-miR-17* hsa-mir-17 13 12554860
hsa-miR-181a hsa-mir-181a-2 9 12554860
hsa-miR-181a hsa-mir-181a-1 1 12554860
hsa-miR-181a* hsa-mir-181a-1 1 12554860
hsa-miR-181a-2* hsa-mir-181a-2 9 12554860
hsa-miR-183 hsa-mir-183 7 12554860
hsa-miR-183* hsa-mir-183 7 12554860
hsa-miR-184 hsa-mir-184 15 12554860
hsa-miR-185 hsa-mir-185 22 12554860
hsa-miR-185* hsa-mir-185 22 12554860
hsa-miR-186 hsa-mir-186 1 12554860
hsa-miR-186* hsa-mir-186 1 12554860
hsa-miR-187 hsa-mir-187 18 12554860
hsa-miR-187* hsa-mir-187 18 12554860
hsa-miR-188-3p hsa-mir-188 X 12554860
hsa-miR-188-5p hsa-mir-188 X 12554860
hsa-miR-190 hsa-mir-190 15 12554860
hsa-miR-191 hsa-mir-191 3 12554860
hsa-miR-191* hsa-mir-191 3 12554860
hsa-miR-192 hsa-mir-192 11 12554860
hsa-miR-192* hsa-mir-192 11 12554860
hsa-miR-196b hsa-mir-196b 7 12554860
hsa-miR-19a hsa-mir-19a 13 12554860
hsa-miR-19a* hsa-mir-19a 13 12554860
hsa-miR-19b hsa-mir-19b-1 13 12554860
hsa-miR-19b hsa-mir-19b-2 X 12554860
hsa-miR-19b-1* hsa-mir-19b-1 13 12554860
hsa-miR-19b-2* hsa-mir-19b-2 X 12554860
hsa-miR-20a hsa-mir-20a 13 12554860
hsa-miR-20a* hsa-mir-20a 13 12554860
hsa-miR-21 hsa-mir-21 17 12554860
hsa-miR-21* hsa-mir-21 17 12554860
hsa-miR-221 hsa-mir-221 X 18555017
hsa-miR-221* hsa-mir-221 X 18555017
hsa-miR-222 hsa-mir-222 X 18555017
hsa-miR-222* hsa-mir-222 X 18555017
hsa-miR-223 hsa-mir-223 X 18555017
hsa-miR-223* hsa-mir-223 X 18555017
hsa-miR-224 hsa-mir-224 X 12554860
hsa-miR-27b hsa-mir-27b 9 12554860
hsa-miR-27b* hsa-mir-27b 9 12554860
hsa-miR-29a hsa-mir-29a 7 12554860
hsa-miR-29a* hsa-mir-29a 7 12554860
hsa-miR-29c hsa-mir-29c 1 12554860
hsa-miR-29c* hsa-mir-29c 1 12554860
hsa-miR-31 hsa-mir-31 9 18555017
hsa-miR-31* hsa-mir-31 9 18555017
hsa-miR-34a hsa-mir-34a 1 12554860
hsa-miR-34a* hsa-mir-34a 1 12554860
hsa-miR-9 hsa-mir-9-1 1 20616011
hsa-miR-9 hsa-mir-9-2 5 20616011
hsa-miR-9 hsa-mir-9-3 15 20616011
hsa-miR-9 hsa-mir-9-1 1 20362537
hsa-miR-9 hsa-mir-9-2 5 20362537
hsa-miR-9 hsa-mir-9-3 15 20362537
hsa-miR-9* hsa-mir-9-1 1 20362537
hsa-miR-92a hsa-mir-92a-1 13 12554860
hsa-miR-92a hsa-mir-92a-2 X 12554860
hsa-miR-92a-1* hsa-mir-92a-1 13 12554860
hsa-miR-92a-2* hsa-mir-92a-2 X 12554860
hsa-miR-93 hsa-mir-93 7 12554860
hsa-miR-93* hsa-mir-93 7 12554860
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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