AutismKB 2.0

Annotation Detail for LCN1


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Basic Information Top
Gene Symbol:LCN1 ( MGC71975,PMFA,TLC,TP,VEGP )
Gene Full Name: lipocalin 1 (tear prealbumin)
Band: 9q34.3
Quick LinksEntrez ID:3933; OMIM: 151675; Uniprot ID:LCN1_HUMAN; ENSEMBL ID: ENSG00000160349; HGNC ID: 6525
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002297
  • Location:chr9 137553106-137558198
  • strand:+
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 137558339 137559199 860 571
hScc1 BcellGSE12603 137559887 137560039 152 1765
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 137555832 137556213 381 0
hScc1 BcellGSE12603 137556393 137556539 146 0
hScc1 BcellGSE12603 137557619 137558244 625 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018