Annotation Detail for LIG3
Basic Information Top
| Gene Symbol: | LIG3 ( LIG2 ) |
|---|---|
| Gene Full Name: | ligase III, DNA, ATP-dependent |
| Band: | 17q12 |
| Quick Links | Entrez ID:3980; OMIM: 600940; Uniprot ID:DNLI3_HUMAN; ENSEMBL ID: ENSG00000005156; HGNC ID: 6600 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 209 | Phosphothreonine (By similarity). | |
| 210 | Phosphoserine. | |
| 227 | Phosphoserine. | |
| 242 | Phosphoserine. | |
| 316 | N6-acetyllysine. | |
| Location(AA) | Modifications | Resource |
|---|
| No data |
- RefSeq ID: NM_002311
- Location:chr17 30331650-30354278
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FoxA1 | MCF7 | MACSdata | 30330893 | 30331066 | 173 | 671 |
| H3K4me2 | HCT116 | GSE10453 | 30330475 | 30331078 | 603 | 874 |
| H3ac | HepG2 | E | 30330475 | 30331409 | 934 | 709 |
| PHF8 | Hs68plusFBS | GSE20725 | 30330464 | 30332734 | 2270 | 52 |
| RNAII | Tamoxifen-MCF7 | GSE14664 | 30331193 | 30331292 | 99 | 408 |
| TAF | Hela | GSE8489 | 30330584 | 30331300 | 716 | 709 |
| TAF | k562 | GSE8489 | 30330475 | 30331530 | 1055 | 648 |
| USF1 | HepG2 | E | 30330548 | 30331448 | 900 | 653 |
| hScc1 | Bcell | GSE12603 | 30331372 | 30331713 | 341 | 108 |
| p130 | shRbSenescent | GSE19898 | 30331321 | 30331812 | 491 | 84 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 30349344 | 30349683 | 339 | 0 |
| CTCF | CD4 | SISSRdata | 30349344 | 30349683 | 339 | 0 |
| CTCF | Jurkat | GSE12889 | 30349395 | 30349541 | 146 | 0 |
| CTCF | G2 | GSE9613 | 30332029 | 30332567 | 538 | 0 |
| CTCF | G2 | GSE9613 | 30349296 | 30350572 | 1276 | 0 |
| H3ac | HepG2 | E | 30332384 | 30333350 | 966 | 0 |
| Myc | K562 | GSE19551 | 30331218 | 30332639 | 1421 | 0 |
| Myc | hES | GSE17917 | 30331672 | 30331875 | 203 | 0 |
| Oct1 | Hela | GSE14283 | 30340326 | 30340355 | 29 | 0 |
| Oct1 | Hela | GSE14283 | 30341318 | 30341347 | 29 | 0 |
| PHF8 | 293T | GSE20725 | 30331122 | 30332411 | 1289 | 0 |
| PHF8 | HeLa | GSE20725 | 30331127 | 30332489 | 1362 | 0 |
| PHF8 | Hs68minusFBS | GSE20725 | 30330981 | 30332647 | 1666 | 0 |
| Rb | Senescent | GSE19898 | 30332021 | 30332258 | 237 | 0 |
| USF2 | HepG2 | E | 30337756 | 30338057 | 301 | 0 |
| hScc1 | Bcell | GSE12603 | 30332199 | 30332526 | 327 | 0 |
| hScc1 | Bcell | GSE12603 | 30349263 | 30349904 | 641 | 0 |
| hScc1 | Bcell | GSE12603 | 30350380 | 30350572 | 192 | 0 |
| hScc1 | CdLS | GSE12603 | 30349186 | 30349940 | 754 | 0 |
| hScc1 | G2 | GSE9613 | 30349296 | 30350572 | 1276 | 0 |
| p130 | Quiescent | GSE19898 | 30331979 | 30332540 | 561 | 0 |
| p130 | Senescent | GSE19898 | 30331953 | 30332532 | 579 | 0 |
| p130 | shRbQuiescent | GSE19898 | 30332061 | 30332683 | 622 | 0 |
| p130 | shRbSenescent | GSE19898 | 30332031 | 30332733 | 702 | 0 |
Validated miRNA targets