AutismKB 2.0

Annotation Detail for ABLIM1


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Basic Information Top
Gene Symbol:ABLIM1 ( ABLIM,DKFZp781D0148,FLJ14564,KIAA0059,LIMAB1,LIMATIN,MGC1224 )
Gene Full Name: actin binding LIM protein 1
Band: 10q25.3
Quick LinksEntrez ID:3983; OMIM: 602330; Uniprot ID:ABLM1_HUMAN; ENSEMBL ID: ENSG00000099204; HGNC ID: 78
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
216Phosphoserine (By similarity).
353Phosphoserine (By similarity).
357Phosphotyrosine.
367Phosphoserine.
373Phosphotyrosine.
396Phosphotyrosine.
406Phosphotyrosine.
410Phosphotyrosine.
426Phosphoserine.
429Phosphothreonine.
431Phosphoserine.
433Phosphothreonine.
435Phosphoserine.
439Phosphotyrosine.
450Phosphoserine.
451Phosphothreonine.
452Phosphoserine.
455Phosphoserine.
458Phosphoserine.
461Phosphotyrosine.
473Phosphoserine.
587Phosphoserine.
640Phosphoserine.
655Phosphoserine.
706Phosphoserine.
Location(AA) Modifications Resource
216Phosphoserine (By similarity).Swiss-Prot 53.0
353Phosphoserine (By similarity).Swiss-Prot 53.0
357Phosphotyrosine.Swiss-Prot 53.0
357PhosphotyrosinePhospho.ELM 6.0
367Phosphoserine (By similarity).Swiss-Prot 53.0
373Phosphotyrosine.Swiss-Prot 53.0
373PhosphotyrosinePhospho.ELM 6.0
396Phosphotyrosine.Swiss-Prot 53.0
396PhosphotyrosinePhospho.ELM 6.0
406PhosphotyrosinePhospho.ELM 6.0
406Phosphotyrosine.Swiss-Prot 53.0
410PhosphotyrosinePhospho.ELM 6.0
410Phosphotyrosine.Swiss-Prot 53.0
431PhosphoserinePhospho.ELM 6.0
431Phosphoserine.Swiss-Prot 53.0
435Phosphoserine.Swiss-Prot 53.0
435PhosphoserinePhospho.ELM 6.0
439PhosphotyrosinePhospho.ELM 6.0
439Phosphotyrosine.Swiss-Prot 53.0
452Phosphoserine.Swiss-Prot 53.0
452PhosphoserinePhospho.ELM 6.0
458Phosphoserine (By similarity).Swiss-Prot 53.0
461PhosphotyrosinePhospho.ELM 6.0
461Phosphotyrosine.Swiss-Prot 53.0
473Phosphoserine.Swiss-Prot 53.0
587Phosphoserine (By similarity).Swiss-Prot 53.0
655PhosphoserinePhospho.ELM 6.0
655Phosphoserine.Swiss-Prot 53.0
706Phosphoserine.Swiss-Prot 53.0
706PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
9S-palmitoylHMM predict
19Phosphoserine(CK1)HMM predict
19Phosphoserine(IKK)HMM predict
23Phosphoserine(CK1)HMM predict
45Phosphoserine(PKA)HMM predict
45Phosphoserine(PKG)HMM predict
56Phosphothreonine(PKC)HMM predict
56Phosphothreonine(PKA)HMM predict
144Phosphotyrosine(Jak)HMM predict
158S-palmitoylHMM predict
216Phosphoserine(CDC2)HMM predict
221O-linkedHMM predict
352Phosphoserine(CK2)HMM predict
355Phosphoserine(PKA)HMM predict
357Phosphotyrosine(INSR)HMM predict
357Phosphotyrosine(SRC)HMM predict
358O-linkedHMM predict
362PhosphoserineHMM predict
367Phosphoserine(CDC2)HMM predict
373Phosphotyrosine(Syk)HMM predict
410SulfotyrosineHMM predict
414Phosphotyrosine(Syk)HMM predict
422Phosphoserine(CK1)HMM predict
431Phosphoserine(CDK)HMM predict
431Phosphoserine(IKK)HMM predict
431PhosphoserineHMM predict
431O-linkedHMM predict
431Phosphoserine(CDC2)HMM predict
433O-linkedHMM predict
433Phosphothreonine(MAPK)HMM predict
439Phosphotyrosine(Syk)HMM predict
451Phosphothreonine(PKA)HMM predict
452Phosphoserine(CK1)HMM predict
452Phosphoserine(ATM)HMM predict
455Phosphoserine(IKK)HMM predict
458Phosphoserine(MAPK)HMM predict
465PhosphoserineHMM predict
467O-linkedHMM predict
467Phosphothreonine(MAPK)HMM predict
469O-linkedHMM predict
486O-linkedHMM predict
490Phosphoserine(PKG)HMM predict
490Phosphoserine(CDC2)HMM predict
502Phosphothreonine(MAPK)HMM predict
561Phosphothreonine(MAPK)HMM predict
587Phosphoserine(PKG)HMM predict
587Phosphoserine(PKC)HMM predict
587PhosphoserineHMM predict
587Phosphoserine(PKB)HMM predict
640Phosphoserine(CDC2)HMM predict
640Phosphoserine(CAMK2)HMM predict
650O-linkedHMM predict
651O-linkedHMM predict
706Phosphoserine(PKB)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001003407
  • Location:chr10 116180859-116434403
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 116434559 116434592 33 172
STAT1 HeLaGSE12783 116433701 116435653 1952 274
TFAP2C MCF7GSE21234 116446818 116447443 625 12727
hScc1 BcellGSE12603 116439862 116440407 545 5731
hScc1 BcellGSE12603 116453396 116453757 361 19173
hScc1 CdLSGSE12603 116453396 116453958 562 19274
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 116416758 116416785 27 0
Rb GrowingGSE19898 116430198 116430383 185 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
3704 mRNA chr10 116514536 116529652 3473 mRNA ABLIM1 chr10 116351030 116518009 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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