AutismKB 2.0

Annotation Detail for FADS3


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Basic Information Top
Gene Symbol:FADS3 ( CYB5RP,LLCDL3 )
Gene Full Name: fatty acid desaturase 3
Band: 11q12.2
Quick LinksEntrez ID:3995; OMIM: 606150; Uniprot ID:FADS3_HUMAN; ENSEMBL ID: ENSG00000221968; HGNC ID: 3576
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
186Histidine box-1.
223Histidine box-2.
387Histidine box-3.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_021727
  • Location:chr11 61397574-61415581
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 61415688 61416057 369 291
hScc1 BcellGSE12603 61415699 61416108 409 322
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 61395179 61395503 324 2234
CTCF CD4SISSRdata 61395179 61395503 324 2234
CTCF JurkatGSE12889 61395246 61395569 323 2167
NRSF pAbJurkat 61395917 61396228 311 1502
hScc1 BcellGSE12603 61395217 61395579 362 2177
hScc1 CdLSGSE12603 61395177 61395579 402 2197
hScc1 G2GSE9613 61395132 61395579 447 2219
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NRSF pAbJurkat 61397285 61398325 1040 0
NRSF pAbJurkat 61408568 61409264 696 0
Nanog hESGSE18292 61405468 61405777 309 0
Oct1 H2O2-HelaGSE14283 61399231 61399260 29 0
Oct1 H2O2-HelaGSE14283 61407985 61408029 44 0
Oct1 HelaGSE14283 61407985 61408025 40 0
Oct1 HelaGSE14283 61408433 61408460 27 0
P300 T30-glioblastomaGSE21026 61411698 61412921 1223 0
RNAII Tamoxifen-MCF7GSE14664 61407986 61408030 44 0
TFAP2C MCF7GSE21234 61413890 61415174 1284 0
hScc1 BcellGSE12603 61403319 61403606 287 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7b hsa-let-7b 22 18668040
hsa-let-7b* hsa-let-7b 22 18668040
hsa-miR-1 hsa-mir-1-2 18 18668040
hsa-miR-1 hsa-mir-1-1 20 18668040
hsa-miR-155 hsa-mir-155 21 18668040
hsa-miR-155* hsa-mir-155 21 18668040
hsa-miR-16 hsa-mir-16-1 13 18668040
hsa-miR-16 hsa-mir-16-2 3 18668040
hsa-miR-30a hsa-mir-30a 6 18668040
hsa-miR-30a* hsa-mir-30a 6 18668040
hsa-miR-30b hsa-mir-30b 8 18668040
hsa-miR-30b* hsa-mir-30b 8 18668040
hsa-miR-30c hsa-mir-30c-2 6 18668040
hsa-miR-30c hsa-mir-30c-1 1 18668040
hsa-miR-30c-1* hsa-mir-30c-1 1 18668040
hsa-miR-30c-2* hsa-mir-30c-2 6 18668040
hsa-miR-30d hsa-mir-30d 8 18668040
hsa-miR-30d* hsa-mir-30d 8 18668040
hsa-miR-30e hsa-mir-30e 1 18668040
hsa-miR-30e* hsa-mir-30e 1 18668040
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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