AutismKB 2.0

Annotation Detail for PRICKLE3


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Basic Information Top
Gene Symbol:PRICKLE3 ( LMO6 )
Gene Full Name: prickle homolog 3 (Drosophila)
Band: Xp11.23
Quick LinksEntrez ID:4007; OMIM: 300111; Uniprot ID:PRIC3_HUMAN; ENSEMBL ID: ENSG00000012211; HGNC ID: 6645
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
502Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006150
  • Location:chrX 48918849-48929719
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 48929727 48929945 218 117
CTCF CD4SISSRdata 48929727 48929945 218 117
CTCF JurkatGSE12889 48929785 48929982 197 164
CTCF G2GSE9613 48929532 48930447 915 270
PHF8 HeLaGSE20725 48929471 48930233 762 133
hScc1 BcellGSE12603 48929598 48930209 611 184
hScc1 G2GSE9613 48929487 48930008 521 28
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 48918792 48918867 75 20
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 48920910 48921103 193 0
CTCF CD4SISSRdata 48920910 48921103 193 0
CTCF G2GSE9613 48919755 48920330 575 0
CTCF G2GSE9613 48920582 48921302 720 0
CTCF G2GSE9613 48921552 48922902 1350 0
CTCF G2GSE9613 48926873 48927688 815 0
CTCF G2GSE9613 48927945 48928672 727 0
ER E2-MCF7GSE14664 48921273 48921306 33 0
H3ac HepG2E 48929330 48929748 418 0
Oct1 HelaGSE14283 48921898 48921933 35 0
Oct1 HelaGSE14283 48923388 48923420 32 0
RNAII Tamoxifen-MCF7GSE14664 48921272 48921309 37 0
Rb shRbQuiescentGSE19898 48925687 48926002 315 0
TFAP2C MCF7GSE21234 48927670 48928133 463 0
hScc1 G2GSE9613 48919337 48919984 647 0
hScc1 G2GSE9613 48920828 48921265 437 0
hScc1 G2GSE9613 48921757 48922784 1027 0
hScc1 G2GSE9613 48927429 48928672 1243 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018