AutismKB 2.0

Annotation Detail for LCNL1


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Basic Information Top
Gene Symbol:LCNL1 ( FLJ45224 )
Gene Full Name: lipocalin-like 1
Band: 9q34.3
Quick LinksEntrez ID:401562; OMIM: NA; Uniprot ID:LCNL1_HUMAN; ENSEMBL ID: ENSG00000214402; HGNC ID: 34436
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_207510
  • Location:chr9 138996176-139000030
  • strand:+
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 139002793 139003772 979 3252
hScc1 BcellGSE12603 139000121 139000491 370 276
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Gata2 K562GSE18868 138996059 138996854 795 0
TFAP2C MCF7GSE21234 138996694 138997440 746 0
hScc1 BcellGSE12603 138996471 138997434 963 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018