AutismKB 2.0

Annotation Detail for LPA


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Basic Information Top
Gene Symbol:LPA ( AK38,APOA,LP )
Gene Full Name: lipoprotein, Lp(a)
Band: 6q25.3-q26
Quick LinksEntrez ID:4018; OMIM: 152200; Uniprot ID:APOA_HUMAN; ENSEMBL ID: ENSG00000198670; HGNC ID: 6667
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
61N-linked (GlcNAc...) (Potential).
101N-linked (GlcNAc...) (Potential).
215N-linked (GlcNAc...) (Potential).
329N-linked (GlcNAc...) (Potential).
443N-linked (GlcNAc...) (Potential).
557N-linked (GlcNAc...) (Potential).
671N-linked (GlcNAc...) (Potential).
785N-linked (GlcNAc...) (Potential).
899N-linked (GlcNAc...) (Potential).
1013N-linked (GlcNAc...) (Potential).
1127N-linked (GlcNAc...) (Potential).
1241N-linked (GlcNAc...) (Potential).
1355N-linked (GlcNAc...) (Potential).
1469N-linked (GlcNAc...) (Potential).
1583N-linked (GlcNAc...) (Potential).
1697N-linked (GlcNAc...) (Potential).
1811N-linked (GlcNAc...) (Potential).
1925N-linked (GlcNAc...) (Potential).
2039N-linked (GlcNAc...) (Potential).
2153N-linked (GlcNAc...) (Potential).
2267N-linked (GlcNAc...) (Potential).
2381N-linked (GlcNAc...) (Potential).
2495N-linked (GlcNAc...) (Potential).
2609N-linked (GlcNAc...) (Potential).
2723N-linked (GlcNAc...) (Potential).
2837N-linked (GlcNAc...) (Potential).
2951N-linked (GlcNAc...) (Potential).
3065N-linked (GlcNAc...) (Potential).
3179N-linked (GlcNAc...) (Potential).
3293N-linked (GlcNAc...) (Potential).
3407N-linked (GlcNAc...) (Potential).
3521N-linked (GlcNAc...) (Potential).
3635N-linked (GlcNAc...) (Potential).
3749N-linked (GlcNAc...) (Potential).
3855N-linked (GlcNAc...) (Potential).
3889N-linked (GlcNAc...) (Potential).
3969N-linked (GlcNAc...) (Potential).
4083N-linked (GlcNAc...) (Potential).
4197N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
Location(AA) Modification Resource
45O-linkedHMM predict
56Phosphothreonine(CDC2)HMM predict
61N-linkedHMM predict
66N-linkedHMM predict
101N-linkedHMM predict
117O-linkedHMM predict
117O-linkedHMM predict
119O-linkedHMM predict
119Phosphothreonine(MAPK)HMM predict
119Phosphothreonine(CDK)HMM predict
119PhosphothreonineHMM predict
128O-linkedHMM predict
159O-linkedHMM predict
170Phosphothreonine(CDC2)HMM predict
215N-linkedHMM predict
231O-linkedHMM predict
231O-linkedHMM predict
233O-linkedHMM predict
233Phosphothreonine(MAPK)HMM predict
233Phosphothreonine(CDK)HMM predict
233PhosphothreonineHMM predict
242O-linkedHMM predict
273O-linkedHMM predict
284Phosphothreonine(CDC2)HMM predict
329N-linkedHMM predict
345O-linkedHMM predict
345O-linkedHMM predict
347O-linkedHMM predict
347Phosphothreonine(MAPK)HMM predict
347Phosphothreonine(CDK)HMM predict
347PhosphothreonineHMM predict
356O-linkedHMM predict
387O-linkedHMM predict
398Phosphothreonine(CDC2)HMM predict
443N-linkedHMM predict
459O-linkedHMM predict
459O-linkedHMM predict
461O-linkedHMM predict
461Phosphothreonine(MAPK)HMM predict
461Phosphothreonine(CDK)HMM predict
461PhosphothreonineHMM predict
470O-linkedHMM predict
501O-linkedHMM predict
512Phosphothreonine(CDC2)HMM predict
557N-linkedHMM predict
573O-linkedHMM predict
573O-linkedHMM predict
575O-linkedHMM predict
575Phosphothreonine(MAPK)HMM predict
575Phosphothreonine(CDK)HMM predict
575PhosphothreonineHMM predict
584O-linkedHMM predict
615O-linkedHMM predict
626Phosphothreonine(CDC2)HMM predict
671N-linkedHMM predict
687O-linkedHMM predict
687O-linkedHMM predict
689O-linkedHMM predict
689Phosphothreonine(MAPK)HMM predict
689Phosphothreonine(CDK)HMM predict
689PhosphothreonineHMM predict
698O-linkedHMM predict
729O-linkedHMM predict
740Phosphothreonine(CDC2)HMM predict
785N-linkedHMM predict
801O-linkedHMM predict
801O-linkedHMM predict
803O-linkedHMM predict
803Phosphothreonine(MAPK)HMM predict
803Phosphothreonine(CDK)HMM predict
803PhosphothreonineHMM predict
812O-linkedHMM predict
843O-linkedHMM predict
854Phosphothreonine(CDC2)HMM predict
899N-linkedHMM predict
915O-linkedHMM predict
915O-linkedHMM predict
917O-linkedHMM predict
917Phosphothreonine(MAPK)HMM predict
917Phosphothreonine(CDK)HMM predict
917PhosphothreonineHMM predict
926O-linkedHMM predict
957O-linkedHMM predict
968Phosphothreonine(CDC2)HMM predict
1013N-linkedHMM predict
1029O-linkedHMM predict
1029O-linkedHMM predict
1031O-linkedHMM predict
1031Phosphothreonine(MAPK)HMM predict
1031Phosphothreonine(CDK)HMM predict
1031PhosphothreonineHMM predict
1040O-linkedHMM predict
1071O-linkedHMM predict
1082Phosphothreonine(CDC2)HMM predict
1127N-linkedHMM predict
1143O-linkedHMM predict
1143O-linkedHMM predict
1145O-linkedHMM predict
1145Phosphothreonine(MAPK)HMM predict
1145Phosphothreonine(CDK)HMM predict
1145PhosphothreonineHMM predict
1154O-linkedHMM predict
1185O-linkedHMM predict
1196Phosphothreonine(CDC2)HMM predict
1241N-linkedHMM predict
1257O-linkedHMM predict
1257O-linkedHMM predict
1259O-linkedHMM predict
1259Phosphothreonine(MAPK)HMM predict
1259Phosphothreonine(CDK)HMM predict
1259PhosphothreonineHMM predict
1268O-linkedHMM predict
1299O-linkedHMM predict
1310Phosphothreonine(CDC2)HMM predict
1355N-linkedHMM predict
1371O-linkedHMM predict
1371O-linkedHMM predict
1373O-linkedHMM predict
1373Phosphothreonine(MAPK)HMM predict
1373Phosphothreonine(CDK)HMM predict
1373PhosphothreonineHMM predict
1382O-linkedHMM predict
1413O-linkedHMM predict
1424Phosphothreonine(CDC2)HMM predict
1469N-linkedHMM predict
1485O-linkedHMM predict
1485O-linkedHMM predict
1487O-linkedHMM predict
1487Phosphothreonine(MAPK)HMM predict
1487Phosphothreonine(CDK)HMM predict
1487PhosphothreonineHMM predict
1496O-linkedHMM predict
1527O-linkedHMM predict
1538Phosphothreonine(CDC2)HMM predict
1583N-linkedHMM predict
1599O-linkedHMM predict
1599O-linkedHMM predict
1601O-linkedHMM predict
1601Phosphothreonine(MAPK)HMM predict
1601Phosphothreonine(CDK)HMM predict
1601PhosphothreonineHMM predict
1610O-linkedHMM predict
1641O-linkedHMM predict
1652Phosphothreonine(CDC2)HMM predict
1697N-linkedHMM predict
1713O-linkedHMM predict
1713O-linkedHMM predict
1715O-linkedHMM predict
1715Phosphothreonine(MAPK)HMM predict
1715Phosphothreonine(CDK)HMM predict
1715PhosphothreonineHMM predict
1724O-linkedHMM predict
1755O-linkedHMM predict
1766Phosphothreonine(CDC2)HMM predict
1811N-linkedHMM predict
1827O-linkedHMM predict
1827O-linkedHMM predict
1829O-linkedHMM predict
1829Phosphothreonine(MAPK)HMM predict
1829Phosphothreonine(CDK)HMM predict
1829PhosphothreonineHMM predict
1838O-linkedHMM predict
1869O-linkedHMM predict
1880Phosphothreonine(CDC2)HMM predict
1925N-linkedHMM predict
1941O-linkedHMM predict
1941O-linkedHMM predict
1943O-linkedHMM predict
1943Phosphothreonine(MAPK)HMM predict
1943Phosphothreonine(CDK)HMM predict
1943PhosphothreonineHMM predict
1952O-linkedHMM predict
1983O-linkedHMM predict
1994Phosphothreonine(CDC2)HMM predict
2039N-linkedHMM predict
2055O-linkedHMM predict
2055O-linkedHMM predict
2057O-linkedHMM predict
2057Phosphothreonine(MAPK)HMM predict
2057Phosphothreonine(CDK)HMM predict
2057PhosphothreonineHMM predict
2066O-linkedHMM predict
2097O-linkedHMM predict
2108Phosphothreonine(CDC2)HMM predict
2153N-linkedHMM predict
2169O-linkedHMM predict
2169O-linkedHMM predict
2171O-linkedHMM predict
2171Phosphothreonine(MAPK)HMM predict
2171Phosphothreonine(CDK)HMM predict
2171PhosphothreonineHMM predict
2180O-linkedHMM predict
2211O-linkedHMM predict
2222Phosphothreonine(CDC2)HMM predict
2267N-linkedHMM predict
2283O-linkedHMM predict
2283O-linkedHMM predict
2285O-linkedHMM predict
2285Phosphothreonine(MAPK)HMM predict
2285Phosphothreonine(CDK)HMM predict
2285PhosphothreonineHMM predict
2294O-linkedHMM predict
2325O-linkedHMM predict
2336Phosphothreonine(CDC2)HMM predict
2381N-linkedHMM predict
2397O-linkedHMM predict
2397O-linkedHMM predict
2399O-linkedHMM predict
2399Phosphothreonine(MAPK)HMM predict
2399Phosphothreonine(CDK)HMM predict
2399PhosphothreonineHMM predict
2408O-linkedHMM predict
2439O-linkedHMM predict
2450Phosphothreonine(CDC2)HMM predict
2495N-linkedHMM predict
2511O-linkedHMM predict
2511O-linkedHMM predict
2513O-linkedHMM predict
2513Phosphothreonine(MAPK)HMM predict
2513Phosphothreonine(CDK)HMM predict
2513PhosphothreonineHMM predict
2522O-linkedHMM predict
2553O-linkedHMM predict
2564Phosphothreonine(CDC2)HMM predict
2609N-linkedHMM predict
2625O-linkedHMM predict
2625O-linkedHMM predict
2627O-linkedHMM predict
2627Phosphothreonine(MAPK)HMM predict
2627Phosphothreonine(CDK)HMM predict
2627PhosphothreonineHMM predict
2636O-linkedHMM predict
2667O-linkedHMM predict
2678Phosphothreonine(CDC2)HMM predict
2723N-linkedHMM predict
2739O-linkedHMM predict
2739O-linkedHMM predict
2741O-linkedHMM predict
2741Phosphothreonine(MAPK)HMM predict
2741Phosphothreonine(CDK)HMM predict
2741PhosphothreonineHMM predict
2750O-linkedHMM predict
2781O-linkedHMM predict
2792Phosphothreonine(CDC2)HMM predict
2837N-linkedHMM predict
2853O-linkedHMM predict
2853O-linkedHMM predict
2855O-linkedHMM predict
2855Phosphothreonine(MAPK)HMM predict
2855Phosphothreonine(CDK)HMM predict
2855PhosphothreonineHMM predict
2864O-linkedHMM predict
2895O-linkedHMM predict
2906Phosphothreonine(CDC2)HMM predict
2951N-linkedHMM predict
2967O-linkedHMM predict
2967O-linkedHMM predict
2969O-linkedHMM predict
2969Phosphothreonine(MAPK)HMM predict
2969Phosphothreonine(CDK)HMM predict
2969PhosphothreonineHMM predict
2978O-linkedHMM predict
3009O-linkedHMM predict
3020Phosphothreonine(CDC2)HMM predict
3065N-linkedHMM predict
3081O-linkedHMM predict
3081O-linkedHMM predict
3083O-linkedHMM predict
3083Phosphothreonine(MAPK)HMM predict
3083Phosphothreonine(CDK)HMM predict
3083PhosphothreonineHMM predict
3092O-linkedHMM predict
3123O-linkedHMM predict
3134Phosphothreonine(CDC2)HMM predict
3179N-linkedHMM predict
3195O-linkedHMM predict
3195O-linkedHMM predict
3197O-linkedHMM predict
3197Phosphothreonine(MAPK)HMM predict
3197Phosphothreonine(CDK)HMM predict
3197PhosphothreonineHMM predict
3206O-linkedHMM predict
3237O-linkedHMM predict
3248Phosphothreonine(CDC2)HMM predict
3293N-linkedHMM predict
3309O-linkedHMM predict
3309O-linkedHMM predict
3311O-linkedHMM predict
3311Phosphothreonine(MAPK)HMM predict
3311Phosphothreonine(CDK)HMM predict
3311PhosphothreonineHMM predict
3320O-linkedHMM predict
3351O-linkedHMM predict
3362Phosphothreonine(CDC2)HMM predict
3407N-linkedHMM predict
3423O-linkedHMM predict
3425O-linkedHMM predict
3434O-linkedHMM predict
3465O-linkedHMM predict
3476Phosphothreonine(CDC2)HMM predict
3521N-linkedHMM predict
3579O-linkedHMM predict
3590Phosphothreonine(CDC2)HMM predict
3635N-linkedHMM predict
3693O-linkedHMM predict
3699Phosphoserine(IKK)HMM predict
3704Phosphothreonine(CDC2)HMM predict
3715SulfotyrosineHMM predict
3749N-linkedHMM predict
3759O-linkedHMM predict
3759O-linkedHMM predict
3763O-linkedHMM predict
3768O-linkedHMM predict
3799O-linkedHMM predict
3805Phosphoserine(IKK)HMM predict
3810Phosphothreonine(CDC2)HMM predict
3821SulfotyrosineHMM predict
3855N-linkedHMM predict
3869O-linkedHMM predict
3871O-linkedHMM predict
3889N-linkedHMM predict
3913O-linkedHMM predict
3919Phosphoserine(IKK)HMM predict
3924Phosphothreonine(CDC2)HMM predict
3969N-linkedHMM predict
3979O-linkedHMM predict
3983O-linkedHMM predict
3985O-linkedHMM predict
3985O-linkedHMM predict
3991O-linkedHMM predict
3996O-linkedHMM predict
4027O-linkedHMM predict
4033Phosphoserine(IKK)HMM predict
4045Phosphothreonine(CDC2)HMM predict
4083N-linkedHMM predict
4099O-linkedHMM predict
4110Phosphoserine(IKK)HMM predict
4118Phosphothreonine(MAPK)HMM predict
4141O-linkedHMM predict
4147Phosphoserine(IKK)HMM predict
4152Phosphothreonine(CDC2)HMM predict
4152Phosphothreonine(CDK)HMM predict
4159Phosphothreonine(PKA)HMM predict
4197N-linkedHMM predict
4219O-linkedHMM predict
4242Phosphothreonine(PKA)HMM predict
4245O-linkedHMM predict
4378Phosphoserine(CK1)HMM predict
4435Phosphoserine(MAPK)HMM predict
4438Phosphotyrosine(INSR)HMM predict
4438Phosphotyrosine(SRC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005577
  • Location:chr6 160872505-161007396
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 161008997 161009199 202 1702
CTCF CD4SISSRdata 161008997 161009199 202 1702
CTCF G2GSE9613 161008800 161009392 592 1700
CTCF G2GSE9613 161019993 161020600 607 12900
hScc1 BcellGSE12603 161008905 161009322 417 1717
hScc1 BcellGSE12603 161020037 161020639 602 12942
hScc1 CdLSGSE12603 161008800 161009356 556 1682
hScc1 G2GSE9613 161008763 161009322 559 1646
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 160875167 160875572 405 0
CTCF CD4SISSRdata 160875167 160875572 405 0
CTCF G2GSE9613 160874986 160875622 636 0
CTCF G2GSE9613 160954901 160955077 176 0
CTCF G2GSE9613 160975990 160976178 188 0
GABP k562GSE8489 160923090 160923467 377 0
Gata2 K562GSE18868 160912260 160912848 588 0
Myc K562GSE19551 160912179 160912524 345 0
TAF HelaGSE8489 160923090 160923467 377 0
hScc1 BcellGSE12603 160875022 160875693 671 0
hScc1 BcellGSE12603 160958789 160959649 860 0
hScc1 BcellGSE12603 160969242 160969879 637 0
hScc1 BcellGSE12603 160982530 160983065 535 0
hScc1 CdLSGSE12603 160874813 160875693 880 0
hScc1 G2GSE9613 160874951 160875559 608 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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