Annotation Detail for LPL
Basic Information Top
| Gene Symbol: | LPL ( HDLCQ11,LIPD ) |
|---|---|
| Gene Full Name: | lipoprotein lipase |
| Band: | 8p21.3 |
| Quick Links | Entrez ID:4023; OMIM: 609708; Uniprot ID:LIPL_HUMAN; ENSEMBL ID: ENSG00000175445; HGNC ID: 6677 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 70 | N-linked (GlcNAc...). | |
| 121 | Nitrated tyrosine (By similarity). | |
| 191 | Nitrated tyrosine (By similarity). | |
| 343 | Nitrated tyrosine (By similarity). | |
| 386 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 70 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 386 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 45 | Phosphothreonine(MAPK) | HMM predict |
| 70 | N-linked | HMM predict |
| 216 | Phosphoserine(CDC2) | HMM predict |
| 216 | Phosphoserine | HMM predict |
| 284 | N-linked | HMM predict |
| 305 | S-palmitoyl | HMM predict |
| 325 | Phosphoserine(PKG) | HMM predict |
| 329 | Phosphotyrosine(Jak) | HMM predict |
| 386 | N-linked | HMM predict |
| 423 | Phosphoserine(CDC2) | HMM predict |
| 438 | Phosphothreonine(PKC) | HMM predict |
- RefSeq ID: NM_000237
- Location:chr8 19841057-19869048
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Fos | K562 | GSE19551 | 19838679 | 19839172 | 493 | 2132 |
| H3K27me3 | colorectal | cancer | 19840385 | 19841181 | 796 | 275 |
| hScc1 | G2 | GSE9613 | 19830733 | 19830953 | 220 | 10215 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 19841034 | 19841376 | 342 | 0 |
| CTCF | G2 | GSE9613 | 19841921 | 19842324 | 403 | 0 |
| RNAII | Tamoxifen-MCF7 | GSE14664 | 19858633 | 19858727 | 94 | 0 |
| RNAII | Tamoxifen-MCF7 | GSE14664 | 19858779 | 19858818 | 39 | 0 |
| RNAII | Tamoxifen-MCF7 | GSE14664 | 19861111 | 19861216 | 105 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-let-7b | hsa-let-7b | 22 | 18668040 |
| hsa-let-7b* | hsa-let-7b | 22 | 18668040 |
| hsa-miR-1 | hsa-mir-1-2 | 18 | 18668040 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 18668040 |
| hsa-miR-155 | hsa-mir-155 | 21 | 18668040 |
| hsa-miR-155* | hsa-mir-155 | 21 | 18668040 |
| hsa-miR-16 | hsa-mir-16-1 | 13 | 18668040 |
| hsa-miR-16 | hsa-mir-16-2 | 3 | 18668040 |
| hsa-miR-30a | hsa-mir-30a | 6 | 18668040 |
| hsa-miR-30a* | hsa-mir-30a | 6 | 18668040 |
| hsa-miR-30b | hsa-mir-30b | 8 | 18668040 |
| hsa-miR-30b* | hsa-mir-30b | 8 | 18668040 |
| hsa-miR-30c | hsa-mir-30c-2 | 6 | 18668040 |
| hsa-miR-30c | hsa-mir-30c-1 | 1 | 18668040 |
| hsa-miR-30c-1* | hsa-mir-30c-1 | 1 | 18668040 |
| hsa-miR-30c-2* | hsa-mir-30c-2 | 6 | 18668040 |
| hsa-miR-30d | hsa-mir-30d | 8 | 18668040 |
| hsa-miR-30d* | hsa-mir-30d | 8 | 18668040 |
| hsa-miR-30e | hsa-mir-30e | 1 | 18668040 |
| hsa-miR-30e* | hsa-mir-30e | 1 | 18668040 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 964 | Unknown | pSILAC | miR-155 | LPL | down 50-25% | 18668040 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000175445 | n_a | n_a | n_a | "adipocyte, lymphocyte, leukocyte, muscle cell" | "benign tumour, malignant tumour, carcinoma, sarcoma" |
Cis-Nats regulation