Annotation Detail for LUM
Basic Information Top
| Gene Symbol: | LUM ( LDC,SLRR2D ) |
|---|---|
| Gene Full Name: | lumican |
| Band: | 12q21.33 |
| Quick Links | Entrez ID:4060; OMIM: 600616; Uniprot ID:LUM_HUMAN; ENSEMBL ID: ENSG00000139329; HGNC ID: 6724 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 19 | Pyrrolidone carboxylic acid. | |
| 20 | Sulfotyrosine (By similarity). | |
| 21 | Sulfotyrosine (By similarity). | |
| 23 | Sulfotyrosine (By similarity). | |
| 30 | Sulfotyrosine (By similarity). | |
| 88 | N-linked (GlcNAc...) (keratan sulfate). | |
| 127 | N-linked (GlcNAc...) (keratan sulfate) | |
| 160 | N-linked (GlcNAc...) (keratan sulfate). | |
| 252 | N-linked (GlcNAc...) (keratan sulfate) | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 88 | N-linked (GlcNAc...) (keratan sulfate). | Swiss-Prot 53.0 |
| 127 | N-linked (GlcNAc...) (keratan sulfate)(Potential). | Swiss-Prot 53.0 |
| 160 | N-linked (GlcNAc...) (keratan sulfate). | Swiss-Prot 53.0 |
| 252 | N-linked (GlcNAc...) (keratan sulfate)(Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 20 | Sulfotyrosine | HMM predict |
| 23 | Sulfotyrosine | HMM predict |
| 70 | Phosphotyrosine(Jak) | HMM predict |
| 88 | N-linked | HMM predict |
| 127 | N-linked | HMM predict |
| 160 | N-linked | HMM predict |
| 188 | Phosphotyrosine(INSR) | HMM predict |
| 224 | Phosphotyrosine(Jak) | HMM predict |
| 279 | Sulfotyrosine | HMM predict |
| 280 | Phosphotyrosine(Syk) | HMM predict |
| 335 | Valine | HMM predict |
- RefSeq ID: NM_002345
- Location:chr12 90021363-90029672
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | Hela | GSE14283 | 90044656 | 90044729 | 73 | 15020 |
| p63 | keratinocytes | GSE17611 | 90036764 | 90037743 | 979 | 7581 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 90016843 | 90017086 | 243 | 4399 |
| P300 | T30-glioblastoma | GSE21026 | 90016633 | 90017509 | 876 | 4293 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 90027071 | 90027271 | 200 | 0 |
| CTCF | CD4 | SISSRdata | 90027071 | 90027271 | 200 | 0 |
| CTCF | Jurkat | GSE12889 | 90026953 | 90027247 | 294 | 0 |
| hScc1 | Bcell | GSE12603 | 90026897 | 90027317 | 420 | 0 |
| hScc1 | CdLS | GSE12603 | 90026831 | 90027430 | 599 | 0 |
Validated miRNA targets