AutismKB 2.0

Annotation Detail for CAPRIN1


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Basic Information Top
Gene Symbol:CAPRIN1 ( GPIAP1,GPIP137,M11S1,RNG105,caprin-1,p137GPI )
Gene Full Name: cell cycle associated protein 1
Band: 11p13
Quick LinksEntrez ID:4076; OMIM: 601178; Uniprot ID:CAPR1_HUMAN; ENSEMBL ID: ENSG00000135387; HGNC ID: 6743
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
611Phosphoserine.
615Phosphoserine.
Location(AA) Modifications Resource
329N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
493N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
67Phosphoserine(ATM)HMM predict
131Phosphoserine(CK1)HMM predict
137Phosphotyrosine(Syk)HMM predict
154Phosphotyrosine(Syk)HMM predict
230Phosphotyrosine(Syk)HMM predict
238PhosphoserineHMM predict
241Phosphotyrosine(INSR)HMM predict
241PhosphotyrosineHMM predict
282Phosphoserine(CDC2)HMM predict
282O-linkedHMM predict
284Phosphoserine(IKK)HMM predict
284Phosphoserine(ATM)HMM predict
284O-linkedHMM predict
290O-linkedHMM predict
290Phosphoserine(IKK)HMM predict
292PhosphothreonineHMM predict
292Phosphothreonine(CDK)HMM predict
329N-linkedHMM predict
343N-linkedHMM predict
347N-linkedHMM predict
383O-linkedHMM predict
390O-linkedHMM predict
430O-linkedHMM predict
493N-linkedHMM predict
523Phosphoserine(ATM)HMM predict
551Phosphotyrosine(Jak)HMM predict
551PhosphotyrosineHMM predict
552Phosphotyrosine(Jak)HMM predict
554Phosphoserine(Jak)HMM predict
555MethylarginineHMM predict
559MethylarginineHMM predict
563MethylarginineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_203364
  • Location:chr11 34029805-34077180
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 34026901 34026938 37 2886
TFAP2C MCF7GSE21234 34023054 34023453 399 6552
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 34030781 34031028 247 0
FOXA1 MCF7GSE15244 34060938 34061112 174 0
FOXA1 MCF7GSE15244 34062503 34063307 804 0
FOXA1 MCF7GSE15244 34065755 34065968 213 0
H3ac HepG2E 34030817 34032510 1693 0
Oct1 H2O2-HelaGSE14283 34042541 34042573 32 0
Oct1 H2O2-HelaGSE14283 34043847 34043874 27 0
Oct1 H2O2-HelaGSE14283 34064835 34064864 29 0
Oct1 HelaGSE14283 34034133 34034175 42 0
Oct1 HelaGSE14283 34042533 34042576 43 0
Oct1 HelaGSE14283 34056974 34057003 29 0
PHF8 HeLaGSE20725 34029487 34031235 1748 0
PHF8 Hs68plusFBSGSE20725 34029402 34031853 2451 0
p130 shRbQuiescentGSE19898 34030364 34030613 249 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-16 hsa-mir-16-1 13 19250063
hsa-miR-16 hsa-mir-16-2 3 19250063
hsa-miR-16-1* hsa-mir-16-1 13 19250063
No data
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
4294 mRNA M11S1 chr11 34029805 34080733 96 EST chr11 34030648 34031328Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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