AutismKB 2.0

Annotation Detail for FAM19A1


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Basic Information Top
Gene Symbol:FAM19A1 ( TAFA-1,TAFA1 )
Gene Full Name: family with sequence similarity 19 (chemokine (C-C motif)-like), member A1
Band: 3p14.1
Quick LinksEntrez ID:407738; OMIM: NA; Uniprot ID:F19A1_HUMAN; ENSEMBL ID: ENSG00000183662; HGNC ID: 21587
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_213609
  • Location:chr3 68136143-68677458
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 68130358 68130391 33 5769
Oct1 HelaGSE14283 68130359 68130389 30 5770
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 68688700 68688733 33 11258
Oct1 HelaGSE14283 68687613 68687646 33 10171
Oct1 HelaGSE14283 68688707 68688762 55 11276
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 68537541 68537749 208 0
ER E2-MCF7GSE14664 68298872 68298904 32 0
KLF4 hESGSE17917 68380478 68380705 227 0
NRSF JurkatGSE13047 68438206 68439163 957 0
NRSF JurkatSISSRdata 68438344 68438809 465 0
NRSF mAbJurkat 68435605 68436787 1182 0
NRSF mAbJurkat 68437363 68441458 4095 0
NRSF-mono JurkatQuESTdata 68438206 68439143 937 0
NRSF-poly JurkatQuESTdata 68438364 68438944 580 0
Nanog hESGSE18292 68136892 68137347 455 0
Oct1 H2O2-HelaGSE14283 68285965 68286015 50 0
Oct1 H2O2-HelaGSE14283 68359767 68359812 45 0
Oct1 H2O2-HelaGSE14283 68572651 68572687 36 0
Oct1 H2O2-HelaGSE14283 68577475 68577506 31 0
Oct1 H2O2-HelaGSE14283 68584020 68584069 49 0
Oct1 H2O2-HelaGSE14283 68669959 68669986 27 0
Oct1 HelaGSE14283 68232146 68232197 51 0
Oct1 HelaGSE14283 68285966 68286006 40 0
Oct1 HelaGSE14283 68354031 68354096 65 0
Oct1 HelaGSE14283 68359730 68359804 74 0
Oct1 HelaGSE14283 68364527 68364576 49 0
Oct1 HelaGSE14283 68377401 68377432 31 0
Oct1 HelaGSE14283 68388732 68388761 29 0
Oct1 HelaGSE14283 68388811 68388839 28 0
Oct1 HelaGSE14283 68434360 68434400 40 0
Oct1 HelaGSE14283 68539612 68539679 67 0
Oct1 HelaGSE14283 68550407 68550438 31 0
Oct1 HelaGSE14283 68572651 68572693 42 0
Oct1 HelaGSE14283 68582546 68582610 64 0
Oct1 HelaGSE14283 68594946 68594979 33 0
Oct1 HelaGSE14283 68654295 68654330 35 0
Oct1 HelaGSE14283 68656734 68656766 32 0
RNAII Tamoxifen-MCF7GSE14664 68317936 68318035 99 0
Rb GrowingGSE19898 68164361 68164525 164 0
Rb QuiescentGSE19898 68618170 68618338 168 0
Stat6 IL-4-hr4GSE17850 68266982 68267570 588 0
hScc1 BcellGSE12603 68139626 68139932 306 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-125b hsa-mir-125b-1 11 18056640
hsa-miR-125b hsa-mir-125b-2 21 18056640
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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