AutismKB 2.0

Annotation Detail for TBC1D3B


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Basic Information Top
Gene Symbol:TBC1D3B ( FLJ78399,PRC17,TBC1D3I )
Gene Full Name: TBC1 domain family, member 3B
Band: 17q12
Quick LinksEntrez ID:414059; OMIM: 610144; Uniprot ID:TBC3A_HUMAN; ENSEMBL ID: ENSG00000224226; HGNC ID: 27011
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001001417
  • Location:chr17 33541291-33550661
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 33524710 33524742 32 16566
RARG MCF7GSE15244 33535818 33536418 600 5174
hScc1 BcellGSE12603 33539788 33540151 363 1322
hScc1 BcellGSE12603 33540506 33540681 175 698
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 33541325 33542387 1062 0
CTCF G2GSE9613 33545336 33545812 476 0
ER E2-MCF7GSE14664 33541546 33541581 35 0
ER E2-MCF7GSE14664 33545892 33545964 72 0
RARA MCF7GSE15244 33541325 33541898 573 0
RARA MCF7GSE15244 33545409 33545925 516 0
RARG MCF7GSE15244 33541325 33541861 536 0
RARG MCF7GSE15244 33547381 33548208 827 0
RNAII Tamoxifen-MCF7GSE14664 33547625 33547719 94 0
hScc1 BcellGSE12603 33541325 33542430 1105 0
hScc1 CdLSGSE12603 33541459 33542042 583 0
hScc1 G2GSE9613 33541325 33542310 985 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
10985 EST chr17 31467682 31528829 10870 mRNA TBC1D3B chr17 31517173 31528043 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018