AutismKB 2.0

Annotation Detail for LCN10


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Basic Information Top
Gene Symbol:LCN10 ( - )
Gene Full Name: lipocalin 10
Band: 9q34.3
Quick LinksEntrez ID:414332; OMIM: 612904; Uniprot ID:LCN10_HUMAN; ENSEMBL ID: ENSG00000187922; HGNC ID: 20892
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
149N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
149N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
149N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001001712
  • Location:chr9 138753798-138757175
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF HelaGSE12889 138757255 138757416 161 160
p63 keratinocytesGSE17611 138757320 138758088 768 529
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Myc K562GSE19551 138755166 138755735 569 0
hScc1 BcellGSE12603 138756219 138756899 680 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018