Annotation Detail for MEFV
Basic Information Top
| Gene Symbol: | MEFV ( FMF,MEF,MGC126560,MGC126586,TRIM20 ) |
|---|---|
| Gene Full Name: | Mediterranean fever |
| Band: | 16p13.3 |
| Quick Links | Entrez ID:4210; OMIM: 608107; Uniprot ID:MEFV_HUMAN; ENSEMBL ID: ENSG00000103313; HGNC ID: 6998 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 437 | Nuclear localization signal (Potential). | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 30 | N-linked | HMM predict |
| 99 | N-linked | HMM predict |
| 104 | Phosphoserine(IKK) | HMM predict |
| 145 | Phosphoserine(ATM) | HMM predict |
| 179 | Phosphoserine(CDK) | HMM predict |
| 179 | Phosphoserine(IKK) | HMM predict |
| 179 | Phosphoserine(CDC2) | HMM predict |
| 206 | N-linked | HMM predict |
| 282 | Phosphothreonine(PKA) | HMM predict |
| 312 | O-linked | HMM predict |
| 345 | O-linked | HMM predict |
| 345 | O-linked | HMM predict |
| 347 | O-linked | HMM predict |
| 349 | Phosphoserine(CDC2) | HMM predict |
| 366 | Phosphoserine(IKK) | HMM predict |
| 366 | O-linked | HMM predict |
| 368 | Phosphoserine(CDC2) | HMM predict |
| 436 | Phosphoserine(PKG) | HMM predict |
| 540 | Phosphothreonine(PKC) | HMM predict |
| 608 | Phosphotyrosine(EGFR) | HMM predict |
| 679 | N-linked | HMM predict |
| 699 | Phosphotyrosine(EGFR) | HMM predict |
| 733 | N-linked | HMM predict |
| 757 | Phosphoserine(CDC2) | HMM predict |
- RefSeq ID: NM_000243
- Location:chr16 3232028-3246627
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 3254078 | 3254734 | 656 | 7779 |
| CTCF | G2 | GSE9613 | 3256751 | 3257191 | 440 | 10344 |
| ETS1 | Jurkat | GSE17954 | 3253543 | 3255060 | 1517 | 7674 |
| Fos | K562 | GSE19551 | 3253567 | 3255042 | 1475 | 7677 |
| H3K4me3 | colorectal | cancer | 3254774 | 3255167 | 393 | 8343 |
| H3ac | HepG2 | E | 3254918 | 3255167 | 249 | 8415 |
| H3ac | HepG2 | E | 3255529 | 3255839 | 310 | 9057 |
| LIN9 | G0 | GSE7516 | 3253684 | 3254629 | 945 | 7529 |
| LIN9 | S | GSE7516 | 3253684 | 3254204 | 520 | 7317 |
| RNAII | Tamoxifen-MCF7 | GSE14664 | 3254800 | 3254836 | 36 | 8191 |
| Rb | Senescent | GSE19898 | 3254169 | 3254592 | 423 | 7753 |
| TAF | Hela | GSE8489 | 3259074 | 3259348 | 274 | 12584 |
| TFAP2C | MCF7 | GSE21234 | 3254480 | 3255119 | 639 | 8172 |
| USF1 | HepG2 | E | 3254704 | 3255167 | 463 | 8308 |
| hScc1 | Bcell | GSE12603 | 3253684 | 3254704 | 1020 | 7567 |
| hScc1 | CdLS | GSE12603 | 3254078 | 3254918 | 840 | 7871 |
| p130 | Quiescent | GSE19898 | 3253659 | 3254087 | 428 | 7246 |
| p130 | Quiescent | GSE19898 | 3254468 | 3254724 | 256 | 7969 |
| p130 | Senescent | GSE19898 | 3253637 | 3254070 | 433 | 7226 |
| p130 | Senescent | GSE19898 | 3254344 | 3255019 | 675 | 8054 |
| p130 | shRbQuiescent | GSE19898 | 3253777 | 3254317 | 540 | 7420 |
| p130 | shRbSenescent | GSE19898 | 3253676 | 3254624 | 948 | 7523 |
| No data |
| No data |
Validated miRNA targets