AutismKB 2.0

Annotation Detail for C9orf173


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Basic Information Top
Gene Symbol:C9orf173 ( FLJ40246 )
Gene Full Name: chromosome 9 open reading frame 173
Band: 9q34.3
Quick LinksEntrez ID:441476; OMIM: NA; Uniprot ID:CI173_HUMAN; ENSEMBL ID: ENSG00000197768; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001004353
  • Location:chr9 139265550-139267754
  • strand:+
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 139268321 139268897 576 855
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 139266914 139267388 474 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
27269 mRNA LOC441476 chr9 137421566 137423771 571 mRNA chr9 137420507 137423786Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018