AutismKB 2.0

Annotation Detail for GALNTL6


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Basic Information Top
Gene Symbol:GALNTL6 ( GALNT17,MGC44629 )
Gene Full Name: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
Band: 4q34.1
Quick LinksEntrez ID:442117; OMIM: NA; Uniprot ID:GLTL6_HUMAN; ENSEMBL ID: ENSG00000174473; HGNC ID: 33844
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
141N-linked (GlcNAc...) (Potential).
588N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001034845
  • Location:chr4 172971231-174199283
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 172970823 172971558 735 41
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 173917328 173917575 247 0
CBP T0-glioblastomaGSE21026 174120313 174120902 589 0
CBP T30-glioblastomaGSE21026 174008296 174008912 616 0
CTCF CD4GSE12889 174171280 174171599 319 0
CTCF CD4GSE12889 174182813 174183088 275 0
CTCF CD4SISSRdata 174171280 174171599 319 0
CTCF CD4SISSRdata 174182813 174183088 275 0
CTCF G2GSE9613 173087131 173087932 801 0
CTCF G2GSE9613 173990236 173990585 349 0
CTCF G2GSE9613 173992234 173992451 217 0
CTCF G2GSE9613 174025249 174025502 253 0
CTCF G2GSE9613 174092550 174092806 256 0
CTCF G2GSE9613 174171079 174171481 402 0
CTCF G2GSE9613 174182988 174183314 326 0
ER MCF7GSE19013 173949333 173949815 482 0
ER MCF7GSE19013 173966902 173967597 695 0
ER MCF7GSE19013 174120654 174121104 450 0
ER MCF7GSE19013 174150333 174151006 673 0
FOXA1 MCF7GSE15244 174196017 174196777 760 0
FOXA1 eGFPGSE10845 174196017 174196777 760 0
Fos K562GSE19551 173301272 173301763 491 0
FoxA1 MCF7MACSdata 173205655 173205841 186 0
FoxA1 MCF7MACSdata 173502143 173502441 298 0
FoxA1 MCF7MACSdata 173568777 173569116 339 0
FoxA1 MCF7MACSdata 174022922 174023118 196 0
FoxA1 MCF7MACSdata 174120346 174120530 184 0
FoxA1 MCF7MACSdata 174196287 174196552 265 0
Gata2 K562GSE18868 174156627 174157345 718 0
Myc K562GSE19551 174156764 174157213 449 0
Nanog ESGSE20650 173105192 173105448 256 0
Nanog ESGSE20650 173802509 173802676 167 0
Nanog ESGSE20650 173867088 173867522 434 0
Nanog ESGSE20650 173967083 173967503 420 0
Nanog hESGSE18292 173151071 173151394 323 0
Nanog hESGSE18292 173420307 173420496 189 0
Nanog hESGSE18292 173644055 173644574 519 0
Nanog hESGSE18292 174103316 174103725 409 0
P300 T0-glioblastomaGSE21026 173917137 173917578 441 0
P300 T0-glioblastomaGSE21026 173933925 173934543 618 0
P300 T0-glioblastomaGSE21026 174159041 174159798 757 0
P300 T30-glioblastomaGSE21026 173672984 173673564 580 0
P300 T30-glioblastomaGSE21026 173916125 173916788 663 0
P300 T30-glioblastomaGSE21026 174008383 174009015 632 0
P300 T30-glioblastomaGSE21026 174120125 174120720 595 0
STAT1 HeLaGSE12783 172982550 172983520 970 0
TFAP2C MCF7GSE21234 173126849 173127263 414 0
TFAP2C MCF7GSE21234 173550437 173551346 909 0
TFAP2C MCF7GSE21234 173966992 173967479 487 0
hScc1 BcellGSE12603 173191802 173192072 270 0
hScc1 BcellGSE12603 173409175 173409317 142 0
hScc1 BcellGSE12603 173987990 173988301 311 0
hScc1 BcellGSE12603 173990272 173990585 313 0
hScc1 BcellGSE12603 174120468 174120787 319 0
hScc1 BcellGSE12603 174171011 174171624 613 0
hScc1 BcellGSE12603 174182932 174183349 417 0
hScc1 CdLSGSE12603 174170815 174171728 913 0
hScc1 G2GSE9613 173987415 173988489 1074 0
hScc1 G2GSE9613 174171042 174171518 476 0
p130 SenescentGSE19898 174139922 174140180 258 0
p63 keratinocytesGSE17611 174139710 174140713 1003 0
p63 keratinocytesGSE17611 174154233 174154914 681 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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