AutismKB 2.0

Annotation Detail for MSH4


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Basic Information Top
Gene Symbol:MSH4 ( - )
Gene Full Name: mutS homolog 4 (E. coli)
Band: 1p31.1
Quick LinksEntrez ID:4438; OMIM: 602105; Uniprot ID:MSH4_HUMAN; ENSEMBL ID: ENSG00000057468; HGNC ID: 7327
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
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Location(AA) Modification Resource
8O-linkedHMM predict
10Phosphoserine(IKK)HMM predict
10O-linkedHMM predict
12O-linkedHMM predict
12O-linkedHMM predict
17O-linkedHMM predict
25Phosphoserine(CDC2)HMM predict
25Phosphoserine(CDK)HMM predict
38Phosphothreonine(CDC2)HMM predict
38Phosphothreonine(CDK)HMM predict
56O-linkedHMM predict
57O-linkedHMM predict
66Phosphoserine(CK1)HMM predict
66O-linkedHMM predict
67O-linkedHMM predict
69O-linkedHMM predict
99N-linkedHMM predict
114Phosphotyrosine(EGFR)HMM predict
117Phosphothreonine(PKC)HMM predict
120Phosphothreonine(MAPK)HMM predict
120Phosphothreonine(CDK)HMM predict
146O-linkedHMM predict
147O-linkedHMM predict
186Phosphoserine(ATM)HMM predict
191N-linkedHMM predict
220N-linkedHMM predict
236N-linkedHMM predict
246N-linkedHMM predict
332N-linkedHMM predict
340N-linkedHMM predict
517Phosphoserine(ATM)HMM predict
532Phosphoserine(CDC2)HMM predict
618Phosphoserine(IKK)HMM predict
635Phosphotyrosine(INSR)HMM predict
665N-linkedHMM predict
666N-linkedHMM predict
682N-linkedHMM predict
725Phosphothreonine(CK2)HMM predict
820Phosphothreonine(PKC)HMM predict
843Phosphotyrosine(INSR)HMM predict
879Phosphothreonine(PKA)HMM predict
902Phosphoserine(PKG)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002440
  • Location:chr1 76035217-76151510
  • strand:+
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Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 76075927 76075961 34 0
ER Fulvestrant-MCF7GSE14664 76084118 76084155 37 0
Oct1 H2O2-HelaGSE14283 76150269 76150301 32 0
Oct1 HelaGSE14283 76054494 76054531 37 0
Oct1 HelaGSE14283 76066501 76066552 51 0
Oct1 HelaGSE14283 76084113 76084162 49 0
Oct1 HelaGSE14283 76085466 76085505 39 0
Oct1 HelaGSE14283 76150265 76150302 37 0
Sox2 hESGSE18292 76147032 76147220 188 0
TFAP2C MCF7GSE21234 76147009 76147522 513 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018