AutismKB 2.0

Annotation Detail for MSR1


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:MSR1 ( CD204,SCARA1,SR-A,phSR1,phSR2 )
Gene Full Name: macrophage scavenger receptor 1
Band: 8p22
Quick LinksEntrez ID:4481; OMIM: 153622; Uniprot ID:MSRE_HUMAN; ENSEMBL ID: ENSG00000038945; HGNC ID: 7376
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
27Phosphoserine (By similarity).
29Phosphothreonine (By similarity).
82N-linked (GlcNAc...) (Potential).
102N-linked (GlcNAc...) (Potential).
143N-linked (GlcNAc...) (Potential).
184N-linked (GlcNAc...) (Potential).
221N-linked (GlcNAc...).
249N-linked (GlcNAc...) (Potential).
267N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
82N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
102N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
143N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
184N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
221N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
249N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
267N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
16Phosphoserine(IKK)HMM predict
82N-linkedHMM predict
102N-linkedHMM predict
104PhosphoserineHMM predict
119PhosphoserineHMM predict
143N-linkedHMM predict
184N-linkedHMM predict
213Phosphoserine(CK1)HMM predict
249N-linkedHMM predict
252N-linkedHMM predict
264Phosphothreonine(PKC)HMM predict
267N-linkedHMM predict
281O-linkedHMM predict
287O-linkedHMM predict
290O-linkedHMM predict
293MethylarginineHMM predict
305O-linkedHMM predict
329O-linkedHMM predict
332O-linkedHMM predict
335O-linkedHMM predict
338O-linkedHMM predict
424Phosphoserine(PKG)HMM predict
425Phosphoserine(IKK)HMM predict
440Phosphoserine(PKG)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002445
  • Location:chr8 16041198-16094670
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Nanog ESGSE20650 16104483 16104916 433 10029
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 16078960 16079000 40 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018