Annotation Detail for NAB1
Basic Information Top
| Gene Symbol: | NAB1 ( - ) |
|---|---|
| Gene Full Name: | NGFI-A binding protein 1 (EGR1 binding protein 1) |
| Band: | 2q32.2 |
| Quick Links | Entrez ID:4664; OMIM: 600800; Uniprot ID:NAB1_HUMAN; ENSEMBL ID: ENSG00000138386; HGNC ID: 7626 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 328 | Phosphoserine. | |
| 403 | Phosphoserine (By similarity). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 180 | Phosphoserine | Phospho.ELM 6.0 |
| 183 | Phosphoserine | Phospho.ELM 6.0 |
| 328 | Phosphoserine. | Swiss-Prot 53.0 |
| 328 | Phosphoserine | Phospho.ELM 6.0 |
| 403 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 88 | Phosphoserine(MAPK) | HMM predict |
| 172 | Phosphoserine | HMM predict |
| 172 | Phosphoserine(CK1) | HMM predict |
| 180 | Phosphoserine(IKK) | HMM predict |
| 183 | Phosphoserine(ATM) | HMM predict |
| 183 | Phosphoserine(IKK) | HMM predict |
| 183 | Phosphoserine(MAPK) | HMM predict |
| 183 | Phosphoserine(CDC2) | HMM predict |
| 188 | Phosphoserine(CK2) | HMM predict |
| 253 | Phosphoserine(PKA) | HMM predict |
| 292 | Phosphothreonine(PKC) | HMM predict |
| 310 | Phosphotyrosine(SRC) | HMM predict |
| 364 | Phosphoserine(ATM) | HMM predict |
| 395 | Phosphoserine(PKG) | HMM predict |
| 407 | Phosphoserine(IKK) | HMM predict |
| 457 | Phosphoserine(CK1) | HMM predict |
| 473 | Phosphothreonine(PKC) | HMM predict |
- RefSeq ID: NM_005966
- Location:chr2 191222092-191265735
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T0-glioblastoma | GSE21026 | 191213560 | 191213954 | 394 | 8336 |
| CBP | T30-glioblastoma | GSE21026 | 191221301 | 191222320 | 1019 | 282 |
| CTCF | G2 | GSE9613 | 191221462 | 191221756 | 294 | 484 |
| Myc | K562 | GSE19551 | 191201993 | 191202251 | 258 | 19971 |
| hScc1 | Bcell | GSE12603 | 191221176 | 191221756 | 580 | 627 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 191253382 | 191253674 | 292 | 0 |
| CTCF | CD4 | SISSRdata | 191253382 | 191253674 | 292 | 0 |
| CTCF | G2 | GSE9613 | 191222109 | 191222369 | 260 | 0 |
| CTCF | G2 | GSE9613 | 191253205 | 191253545 | 340 | 0 |
| Fos | K562 | GSE19551 | 191241837 | 191242351 | 514 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 191222638 | 191223449 | 811 | 0 |
| H3K4me3 | colorectal | cancer | 191222844 | 191223625 | 781 | 0 |
| H3ac | HepG2 | E | 191222638 | 191223625 | 987 | 0 |
| Oct4 | hES | GSE17917 | 191253388 | 191253716 | 328 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 191221306 | 191223005 | 1699 | 0 |
| TFAP2C | MCF7 | GSE21234 | 191252979 | 191253675 | 696 | 0 |
| VDR | GM10855-stim | GSE22484 | 191241673 | 191244711 | 3038 | 0 |
| VDR | GM10861-stim | GSE22484 | 191242883 | 191244641 | 1758 | 0 |
| hScc1 | Bcell | GSE12603 | 191252883 | 191253622 | 739 | 0 |
| hScc1 | CdLS | GSE12603 | 191252773 | 191253724 | 951 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15416 | mRNA | NAB1 | chr2 | 191339353 | 191382997 | 15731 | EST | chr2 | 191367266 | 191398948 | Non-exonic Bidirectional (NOB) pairs | |