AutismKB 2.0

Annotation Detail for NUBP1


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:NUBP1 ( MGC117406,MGC130052,MGC130053,NBP,NBP1 )
Gene Full Name: nucleotide binding protein 1 (MinD homolog, E. coli)
Band: 16p13.13
Quick LinksEntrez ID:4682; OMIM: 600280; Uniprot ID:NUBP1_HUMAN; ENSEMBL ID: ENSG00000103274; HGNC ID: 8041
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
1N-acetylmethionine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
21Phosphoserine(PKB)HMM predict
38O-linkedHMM predict
38Phosphothreonine(MAPK)HMM predict
52Phosphothreonine(PKC)HMM predict
229N-linkedHMM predict
308AsparagineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002484
  • Location:chr16 10745217-10770708
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 10738487 10738738 251 6605
CTCF CD4SISSRdata 10738487 10738738 251 6605
CTCF HelaGSE12889 10738493 10738692 199 6625
CTCF G2GSE9613 10730806 10731300 494 14165
CTCF G2GSE9613 10738386 10738697 311 6676
E2F4 G0GSE7516 10745004 10745407 403 12
E2F4 SGSE7516 10745004 10745378 374 27
ER E2-MCF7GSE14664 10725771 10725803 32 19431
ER E2-MCF7GSE14664 10727811 10727843 32 17391
ER Fulvestrant-MCF7GSE14664 10725767 10725803 36 19433
ETS1 JurkatGSE17954 10744691 10745721 1030 12
Fos K562GSE19551 10740051 10740480 429 4952
KLF4 hESGSE17917 10738543 10738728 185 6582
Myc hESGSE17917 10725273 10725667 394 19748
Oct1 H2O2-HelaGSE14283 10727015 10727072 57 18174
Oct1 H2O2-HelaGSE14283 10729527 10729555 28 15677
Oct1 HelaGSE14283 10725771 10725807 36 19429
Oct1 HelaGSE14283 10727010 10727075 65 18175
Oct1 HelaGSE14283 10730541 10730578 37 14658
Oct1 HelaGSE14283 10733939 10734012 73 11242
Oct1 HelaGSE14283 10738394 10738472 78 6785
P300 T30-glioblastomaGSE21026 10730891 10731711 820 13917
PAX3-FKHR RDGSE19063 10725091 10725660 569 19842
TAF HelaGSE8489 10745004 10745307 303 62
hScc1 BcellGSE12603 10738386 10738726 340 6662
hScc1 BcellGSE12603 10739621 10739973 352 5421
hScc1 CdLSGSE12603 10738386 10738726 340 6662
hScc1 CdLSGSE12603 10739511 10739973 462 5476
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NFkBII GM10847GSE19485 10776113 10778392 2279 6544
NFkBII GM10847GSE19485 10781635 10782616 981 11417
NFkBII GM12878GSE19485 10775951 10777403 1452 5969
NFkBII GM12878GSE19485 10777546 10778415 869 7272
NFkBII GM12892GSE19485 10781766 10782933 1167 11641
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 10768381 10768719 338 0
Fos K562GSE19551 10750364 10750702 338 0
GABP k562GSE8489 10745004 10745612 608 0
H3ac HepG2E 10745004 10746074 1070 0
Oct1 H2O2-HelaGSE14283 10746229 10746262 33 0
Oct1 HelaGSE14283 10746227 10746264 37 0
Oct1 HelaGSE14283 10751337 10751374 37 0
Oct1 HelaGSE14283 10770268 10770336 68 0
PHF8 293TGSE20725 10744782 10745906 1124 0
PHF8 HeLaGSE20725 10744830 10746064 1234 0
PHF8 Hs68plusFBSGSE20725 10744917 10746358 1441 0
Rb GrowingGSE19898 10745355 10745682 327 0
Rb QuiescentGSE19898 10745136 10745615 479 0
Rb SenescentGSE19898 10745049 10745885 836 0
VDR GM10855-stimGSE22484 10766870 10768125 1255 0
VDR GM10861-stimGSE22484 10766722 10768177 1455 0
hScc1 BcellGSE12603 10745004 10745443 439 0
p130 QuiescentGSE19898 10745021 10745526 505 0
p130 SenescentGSE19898 10744903 10745674 771 0
p130 shRbQuiescentGSE19898 10745025 10745780 755 0
p130 shRbSenescentGSE19898 10745047 10745781 734 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
9616 mRNA NUBP1 chr16 10745217 10770709 389 mRNA chr16 10768033 10776354Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved