AutismKB 2.0

Annotation Detail for RERE


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Basic Information Top
Gene Symbol:RERE ( ARG,ARP,ATN1L,DNB1,FLJ38775,KIAA0458 )
Gene Full Name: arginine-glutamic acid dipeptide (RE) repeats
Band: 1p36.23
Quick LinksEntrez ID:473; OMIM: 605226; Uniprot ID:RERE_HUMAN; ENSEMBL ID: ENSG00000142599; HGNC ID: 9965
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
53Phosphoserine.
56Phosphoserine.
304Phosphoserine.
594Phosphoserine.
599Phosphothreonine.
600Phosphoserine (By similarity).
613Phosphoserine.
642Phosphoserine.
656Phosphoserine.
675Phosphoserine.
679Phosphoserine.
1106Phosphoserine.
1113Phosphoserine.
1115Phosphoserine.
Location(AA) Modifications Resource
594Phosphoserine.Swiss-Prot 53.0
594PhosphoserinePhospho.ELM 6.0
599Phosphothreonine.Swiss-Prot 53.0
599PhosphothreoninePhospho.ELM 6.0
600Phosphoserine (By similarity).Swiss-Prot 53.0
613Phosphoserine.Swiss-Prot 53.0
613PhosphoserinePhospho.ELM 6.0
656Phosphoserine.Swiss-Prot 53.0
656PhosphoserinePhospho.ELM 6.0
675Phosphoserine (By similarity).Swiss-Prot 53.0
679Phosphoserine (By similarity).Swiss-Prot 53.0
1106PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
53Phosphoserine(CK2)HMM predict
56Phosphoserine(CK1)HMM predict
56Phosphoserine(CK2)HMM predict
56Phosphoserine(CK2)HMM predict
56Phosphoserine(IKK)HMM predict
63N-linkedHMM predict
64N-linkedHMM predict
89PhosphothreonineHMM predict
112Phosphotyrosine(Jak)HMM predict
142Phosphoserine(CDC2)HMM predict
142Phosphoserine(CDK)HMM predict
209N-linkedHMM predict
246N-linkedHMM predict
280N-linkedHMM predict
304Phosphoserine(CDC2)HMM predict
304Phosphoserine(MAPK)HMM predict
368Phosphothreonine(PKC)HMM predict
446Phosphoserine(PKC)HMM predict
468O-linkedHMM predict
468O-linkedHMM predict
468Phosphoserine(PKA)HMM predict
468Phosphoserine(PKB)HMM predict
468PhosphoserineHMM predict
469O-linkedHMM predict
469Phosphothreonine(MAPK)HMM predict
473O-linkedHMM predict
473Phosphothreonine(MAPK)HMM predict
473Phosphothreonine(CDK)HMM predict
475O-linkedHMM predict
498Phosphoserine(CK1)HMM predict
505Phosphotyrosine(INSR)HMM predict
507S-palmitoylHMM predict
574Phosphothreonine(PKC)HMM predict
577Phosphoserine(PKC)HMM predict
594Phosphoserine(CDC2)HMM predict
600Phosphoserine(CDC2)HMM predict
608Phosphoserine(CK1)HMM predict
613Phosphoserine(CDC2)HMM predict
613Phosphoserine(CDK)HMM predict
615O-linkedHMM predict
618Phosphoserine(IKK)HMM predict
619O-linkedHMM predict
620Phosphoserine(IKK)HMM predict
622N-linkedHMM predict
624Phosphoserine(IKK)HMM predict
628Phosphothreonine(PKC)HMM predict
632Phosphoserine(PKG)HMM predict
642Phosphoserine(CDC2)HMM predict
642Phosphoserine(CDK)HMM predict
642PhosphoserineHMM predict
656Phosphoserine(CK2)HMM predict
666Phosphoserine(CDK)HMM predict
679Phosphoserine(CDC2)HMM predict
679Phosphoserine(IKK)HMM predict
688Phosphoserine(CK1)HMM predict
690Phosphoserine(CK1)HMM predict
692Phosphoserine(CK1)HMM predict
692PhosphoserineHMM predict
699Phosphoserine(ATM)HMM predict
708N-linkedHMM predict
712O-linkedHMM predict
712Phosphoserine(CDC2)HMM predict
712Phosphoserine(CDK)HMM predict
712Phosphoserine(IKK)HMM predict
714Phosphoserine(IKK)HMM predict
717Phosphoserine(CDC2)HMM predict
721N-linkedHMM predict
723Phosphoserine(CK1)HMM predict
723Phosphoserine(CK2)HMM predict
723Phosphoserine(ATM)HMM predict
725Phosphoserine(CK1)HMM predict
727Phosphoserine(CK1)HMM predict
727Phosphoserine(IKK)HMM predict
728Phosphoserine(CK1)HMM predict
748O-linkedHMM predict
748Phosphothreonine(MAPK)HMM predict
752O-linkedHMM predict
753O-linkedHMM predict
758Phosphothreonine(CDK)HMM predict
763O-linkedHMM predict
763O-linkedHMM predict
763Phosphothreonine(MAPK)HMM predict
767O-linkedHMM predict
767Phosphothreonine(MAPK)HMM predict
769O-linkedHMM predict
769O-linkedHMM predict
771O-linkedHMM predict
778O-linkedHMM predict
778Phosphoserine(IKK)HMM predict
782O-linkedHMM predict
782Phosphoserine(ATM)HMM predict
813O-linkedHMM predict
813Phosphoserine(CDC2)HMM predict
813Phosphoserine(CDK)HMM predict
813Phosphoserine(ATM)HMM predict
821O-linkedHMM predict
821Phosphoserine(CDC2)HMM predict
821Phosphoserine(CDK)HMM predict
837O-linkedHMM predict
837O-linkedHMM predict
840O-linkedHMM predict
888Phosphoserine(CDC2)HMM predict
903Phosphoserine(ATM)HMM predict
905Phosphoserine(IKK)HMM predict
909Phosphoserine(ATM)HMM predict
934Phosphothreonine(CDC2)HMM predict
955Phosphoserine(CDC2)HMM predict
974O-linkedHMM predict
974Phosphoserine(CK1)HMM predict
976Phosphoserine(CK1)HMM predict
982O-linkedHMM predict
994Phosphoserine(ATM)HMM predict
999O-linkedHMM predict
1000Phosphoserine(CDC2)HMM predict
1000Phosphoserine(CDK)HMM predict
1000Phosphoserine(IKK)HMM predict
1010Phosphoserine(ATM)HMM predict
1010Phosphoserine(IKK)HMM predict
1019O-linkedHMM predict
1048O-linkedHMM predict
1048Phosphothreonine(MAPK)HMM predict
1051O-linkedHMM predict
1054O-linkedHMM predict
1054Phosphoserine(IKK)HMM predict
1055O-linkedHMM predict
1056O-linkedHMM predict
1057O-linkedHMM predict
1057O-linkedHMM predict
1057Phosphothreonine(CDC2)HMM predict
1057Phosphothreonine(CDK)HMM predict
1065O-linkedHMM predict
1106O-linkedHMM predict
1106Phosphoserine(CDC2)HMM predict
1106Phosphoserine(CDK)HMM predict
1106Phosphoserine(ATM)HMM predict
1106Phosphoserine(IKK)HMM predict
1113O-linkedHMM predict
1113Phosphoserine(CDC2)HMM predict
1115O-linkedHMM predict
1115Phosphoserine(CDC2)HMM predict
1115Phosphoserine(IKK)HMM predict
1115PhosphoserineHMM predict
1119O-linkedHMM predict
1123Phosphothreonine(MAPK)HMM predict
1123Phosphothreonine(CDK)HMM predict
1231O-linkedHMM predict
1238O-linkedHMM predict
1255Phosphothreonine(PKC)HMM predict
1279N-linkedHMM predict
1421N-linkedHMM predict
1448O-linkedHMM predict
1497Phosphothreonine(CDC2)HMM predict
1554Phosphotyrosine(Syk)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001042682
  • Location:chr1 8335052-8406333
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 8325912 8326800 888 8697
CTCF CD4GSE12889 8331660 8331909 249 3268
CTCF CD4SISSRdata 8331660 8331909 249 3268
CTCF G2GSE9613 8325782 8326006 224 9159
CTCF G2GSE9613 8327848 8328066 218 7096
CTCF G2GSE9613 8331489 8332856 1367 2880
ER Breast-CancerGSE22609 8325865 8326916 1051 8662
KLF4 hESGSE17917 8333270 8333431 161 1702
P300 T0-glioblastomaGSE21026 8325925 8326684 759 8748
P300 T30-glioblastomaGSE21026 8325617 8327139 1522 8675
Rb GrowingGSE19898 8325924 8326449 525 8866
Rb QuiescentGSE19898 8325775 8326304 529 9013
Rb SenescentGSE19898 8325710 8326581 871 8907
Rb shRbSenescenceGSE19898 8326029 8326263 234 8907
hScc1 BcellGSE12603 8331454 8332202 748 3225
hScc1 BcellGSE12603 8334740 8335133 393 116
hScc1 CdLSGSE12603 8331300 8332161 861 3322
hScc1 G2GSE9613 8331454 8332893 1439 2879
p130 QuiescentGSE19898 8325946 8326320 374 8920
p130 shRbQuiescentGSE19898 8325660 8326922 1262 8762
p130 shRbSenescentGSE19898 8325779 8326475 696 8926
p63 keratinocytesGSE17611 8334283 8335175 892 324
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 8357543 8357753 210 0
CTCF CD4SISSRdata 8357543 8357753 210 0
CTCF G2GSE9613 8338279 8339165 886 0
CTCF G2GSE9613 8340914 8341294 380 0
CTCF G2GSE9613 8341710 8342645 935 0
CTCF G2GSE9613 8345439 8345741 302 0
ER MCF7GSE19013 8373688 8374235 547 0
ER MCF7GSE19013 8378036 8378530 494 0
FOXA1 MCF7GSE15244 8353135 8353436 301 0
FOXA1 MCF7GSE15244 8394649 8395686 1037 0
FoxA1 MCF7MACSdata 8395086 8395513 427 0
H3K4me3 colorectalcancer 8405772 8406059 287 0
H3ac HepG2E 8353135 8353759 624 0
H3ac HepG2E 8404259 8406174 1915 0
Oct1 H2O2-HelaGSE14283 8343598 8343648 50 0
Oct1 HelaGSE14283 8343598 8343649 51 0
RNAII Tamoxifen-MCF7GSE14664 8360678 8360722 44 0
RNAII Tamoxifen-MCF7GSE14664 8362602 8362690 88 0
STAT1 HeLaGSE12783 8390423 8391283 860 0
hScc1 BcellGSE12603 8338383 8338706 323 0
hScc1 BcellGSE12603 8341710 8341837 127 0
hScc1 BcellGSE12603 8342312 8342612 300 0
hScc1 BcellGSE12603 8348985 8349335 350 0
hScc1 BcellGSE12603 8358048 8358446 398 0
hScc1 BcellGSE12603 8391729 8392298 569 0
hScc1 BcellGSE12603 8405341 8406246 905 0
hScc1 CdLSGSE12603 8380188 8380513 325 0
hScc1 CdLSGSE12603 8391388 8392153 765 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-200b hsa-mir-200b 1 17923093
hsa-miR-200b* hsa-mir-200b 1 17923093
hsa-miR-429 hsa-mir-429 1 17923093
No data
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
154 EST chr1 8418970 8429164 10194 mRNA RERE chr1 8346722 8811790 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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