AutismKB 2.0

Annotation Detail for LRRC18


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:LRRC18 ( MGC34773,UNQ933,UNQ9338,VKGE9338 )
Gene Full Name: leucine rich repeat containing 18
Band: 10q11.23
Quick LinksEntrez ID:474354; OMIM: NA; Uniprot ID:LRC18_HUMAN; ENSEMBL ID: ENSG00000165383; HGNC ID: 23199
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
9O-linkedHMM predict
210S-palmitoylHMM predict
231Phosphothreonine(CDC2)HMM predict
231Phosphothreonine(MAPK)HMM predict
231Phosphothreonine(CDK)HMM predict
235O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001006939
  • Location:chr10 49787536-49792282
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 49805070 49805114 44 12810
TFAP2C MCF7GSE21234 49809073 49809532 459 17020
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 49781516 49781584 68 5987
Oct1 HelaGSE14283 49781521 49781601 80 5976
No data
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018