AutismKB 2.0

Annotation Detail for NELL1


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Basic Information Top
Gene Symbol:NELL1 ( FLJ45906,IDH3GL,NRP1 )
Gene Full Name: NEL-like 1 (chicken)
Band: 11p15.1
Quick LinksEntrez ID:4745; OMIM: 602319; Uniprot ID:NELL1_HUMAN; ENSEMBL ID: ENSG00000165973; HGNC ID: 7750
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
40N-linked (GlcNAc...) (Potential).
53N-linked (GlcNAc...) (Potential).
83N-linked (GlcNAc...) (Potential).
224N-linked (GlcNAc...) (Potential).
294N-linked (GlcNAc...) (Potential).
372N-linked (GlcNAc...) (Potential).
511N-linked (GlcNAc...) (Potential).
562N-linked (GlcNAc...) (Potential).
609N-linked (GlcNAc...) (Potential).
708N-linked (GlcNAc...) (Potential).
732N-linked (GlcNAc...) (Potential).
758N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
40N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
53N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
83N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
224N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
294N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
372N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
511N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
562N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
609N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
708N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
732N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
758N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
83N-linkedHMM predict
92O-linkedHMM predict
119Phosphoserine(CK1)HMM predict
155Phosphoserine(CK2)HMM predict
224N-linkedHMM predict
262Phosphoserine(PKG)HMM predict
285Phosphoserine(IKK)HMM predict
294N-linkedHMM predict
313N-linkedHMM predict
350Phosphothreonine(PKC)HMM predict
372N-linkedHMM predict
511N-linkedHMM predict
562N-linkedHMM predict
568N-linkedHMM predict
609N-linkedHMM predict
615N-linkedHMM predict
631O-linkedHMM predict
686S-palmitoylHMM predict
691Phosphothreonine(PKA)HMM predict
692Phosphoserine(PKA)HMM predict
708N-linkedHMM predict
745S-palmitoylHMM predict
746S-palmitoylHMM predict
758N-linkedHMM predict
777Phosphoserine(CK1)HMM predict
788S-palmitoylHMM predict
790O-linkedHMM predict
792LysineHMM predict
793S-farnesylHMM predict
794LysineHMM predict
799S-farnesylHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006157
  • Location:chr11 20647711-21553575
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K27me3 colorectalcancer 20644948 20647312 2364 1582
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 21570881 21571321 440 17526
Oct1 H2O2-HelaGSE14283 21554710 21554742 32 1151
Oct1 HelaGSE14283 21554712 21554742 30 1152
P300 T0-glioblastomaGSE21026 21570881 21571254 373 17492
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 20733790 20734035 245 0
CBP T0-glioblastomaGSE21026 20791069 20791676 607 0
CBP T0-glioblastomaGSE21026 20873396 20873950 554 0
CBP T30-glioblastomaGSE21026 20873394 20873846 452 0
ER E2-MCF7GSE14664 20846091 20846126 35 0
ER Fulvestrant-MCF7GSE14664 20846092 20846137 45 0
ER Fulvestrant-MCF7GSE14664 20856501 20856535 34 0
FOXA1 DLD1GSE12801 21530939 21531405 466 0
FOXA1 MCF7GSE15244 21530863 21531585 722 0
FoxA1 MCF7MACSdata 21039250 21039471 221 0
KLF4 hESGSE17917 20734830 20734998 168 0
NRSF JurkatGSE13047 20737592 20738060 468 0
NRSF JurkatGSE13047 20832231 20832860 629 0
NRSF JurkatGSE13047 20951876 20952647 771 0
NRSF JurkatGSE13047 21363826 21364227 401 0
NRSF mAbJurkat 20829872 20833032 3160 0
NRSF mAbJurkat 20950341 20951197 856 0
NRSF mAbJurkat 20951577 20953075 1498 0
NRSF mAbJurkat 21363088 21365495 2407 0
NRSF-mono JurkatQuESTdata 20737689 20738101 412 0
NRSF-mono JurkatQuESTdata 20832244 20832859 615 0
NRSF-mono JurkatQuESTdata 20951940 20952528 588 0
NRSF-mono JurkatQuESTdata 21363825 21364177 352 0
NRSF-poly JurkatQuESTdata 20737592 20738069 477 0
NRSF-poly JurkatQuESTdata 20832231 20832869 638 0
NRSF-poly JurkatQuESTdata 20951840 20952515 675 0
NRSF-poly JurkatQuESTdata 21363881 21364221 340 0
Nanog ESGSE20650 20944643 20944989 346 0
Nanog ESGSE20650 21044106 21044555 449 0
Nanog ESGSE20650 21273665 21274072 407 0
Nanog ESGSE20650 21425724 21426346 622 0
Nanog hESGSE18292 20811727 20812125 398 0
Nanog hESGSE18292 20859515 20859895 380 0
Nanog hESGSE18292 21043827 21044522 695 0
Oct1 H2O2-HelaGSE14283 20845183 20845211 28 0
Oct1 H2O2-HelaGSE14283 20852331 20852360 29 0
Oct1 H2O2-HelaGSE14283 20984022 20984061 39 0
Oct1 H2O2-HelaGSE14283 21189518 21189548 30 0
Oct1 H2O2-HelaGSE14283 21327478 21327510 32 0
Oct1 H2O2-HelaGSE14283 21375617 21375662 45 0
Oct1 H2O2-HelaGSE14283 21428935 21428962 27 0
Oct1 H2O2-HelaGSE14283 21447706 21447735 29 0
Oct1 H2O2-HelaGSE14283 21456399 21456426 27 0
Oct1 HelaGSE14283 20852324 20852361 37 0
Oct1 HelaGSE14283 20935750 20935779 29 0
Oct1 HelaGSE14283 20947862 20947911 49 0
Oct1 HelaGSE14283 20954166 20954194 28 0
Oct1 HelaGSE14283 20984023 20984059 36 0
Oct1 HelaGSE14283 20998082 20998110 28 0
Oct1 HelaGSE14283 21013759 21013796 37 0
Oct1 HelaGSE14283 21013965 21014021 56 0
Oct1 HelaGSE14283 21070222 21070309 87 0
Oct1 HelaGSE14283 21095777 21095849 72 0
Oct1 HelaGSE14283 21189519 21189549 30 0
Oct1 HelaGSE14283 21203423 21203459 36 0
Oct1 HelaGSE14283 21320216 21320243 27 0
Oct1 HelaGSE14283 21327437 21327550 113 0
Oct1 HelaGSE14283 21428936 21428967 31 0
Oct1 HelaGSE14283 21433665 21433691 26 0
Oct1 HelaGSE14283 21447706 21447735 29 0
Oct1 HelaGSE14283 21455898 21455936 38 0
Oct1 HelaGSE14283 21456604 21456635 31 0
PAX3-FKHR Rh4GSE19063 20748312 20749302 990 0
TFAP2C MCF7GSE21234 21545691 21546260 569 0
hScc1 BcellGSE12603 21489793 21490321 528 0
hScc1 CdLSGSE12603 21141211 21141565 354 0
hScc1 CdLSGSE12603 21489972 21490321 349 0
hScc1 G2GSE9613 21489757 21490252 495 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7b hsa-let-7b 22 18668040
hsa-let-7b hsa-let-7b 22 18668040
hsa-let-7b* hsa-let-7b 22 18668040
hsa-let-7b* hsa-let-7b 22 18668040
hsa-miR-1 hsa-mir-1-2 18 18668040
hsa-miR-1 hsa-mir-1-1 20 18668040
hsa-miR-1 hsa-mir-1-2 18 18668040
hsa-miR-1 hsa-mir-1-1 20 18668040
hsa-miR-155 hsa-mir-155 21 18668040
hsa-miR-155 hsa-mir-155 21 18668040
hsa-miR-155* hsa-mir-155 21 18668040
hsa-miR-155* hsa-mir-155 21 18668040
hsa-miR-16 hsa-mir-16-1 13 18668040
hsa-miR-16 hsa-mir-16-2 3 18668040
hsa-miR-16 hsa-mir-16-1 13 18668040
hsa-miR-16 hsa-mir-16-2 3 18668040
hsa-miR-30a hsa-mir-30a 6 18668040
hsa-miR-30a hsa-mir-30a 6 18668040
hsa-miR-30a* hsa-mir-30a 6 18668040
hsa-miR-30a* hsa-mir-30a 6 18668040
hsa-miR-30b hsa-mir-30b 8 18668040
hsa-miR-30b hsa-mir-30b 8 18668040
hsa-miR-30b* hsa-mir-30b 8 18668040
hsa-miR-30b* hsa-mir-30b 8 18668040
hsa-miR-30c hsa-mir-30c-2 6 18668040
hsa-miR-30c hsa-mir-30c-1 1 18668040
hsa-miR-30c hsa-mir-30c-2 6 18668040
hsa-miR-30c hsa-mir-30c-1 1 18668040
hsa-miR-30c-1* hsa-mir-30c-1 1 18668040
hsa-miR-30c-1* hsa-mir-30c-1 1 18668040
hsa-miR-30c-2* hsa-mir-30c-2 6 18668040
hsa-miR-30c-2* hsa-mir-30c-2 6 18668040
hsa-miR-30d hsa-mir-30d 8 18668040
hsa-miR-30d hsa-mir-30d 8 18668040
hsa-miR-30d* hsa-mir-30d 8 18668040
hsa-miR-30d* hsa-mir-30d 8 18668040
hsa-miR-30e hsa-mir-30e 1 18668040
hsa-miR-30e hsa-mir-30e 1 18668040
hsa-miR-30e* hsa-mir-30e 1 18668040
hsa-miR-30e* hsa-mir-30e 1 18668040
No data
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
4219 mRNA NELL1 chr11 20647711 21553576 885 mRNA LOC283112 chr11 20644312 20648596 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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