AutismKB 2.0

Annotation Detail for NFIX


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Basic Information Top
Gene Symbol:NFIX ( NF1A )
Gene Full Name: nuclear factor I/X (CCAAT-binding transcription factor)
Band: 19p13.13
Quick LinksEntrez ID:4784; OMIM: 164005; Uniprot ID:NFIX_HUMAN; ENSEMBL ID: ENSG00000008441; HGNC ID: 7788
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
280Phosphoserine.
284Phosphoserine (By similarity).
288Phosphoserine (By similarity).
Location(AA) Modifications Resource
284Phosphoserine (By similarity).Swiss-Prot 53.0
288Phosphoserine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
40Phosphotyrosine(Jak)HMM predict
49Phosphoserine(CK2)HMM predict
49Phosphoserine(CK1)HMM predict
153Phosphoserine(CDC2)HMM predict
188Phosphoserine(CK2)HMM predict
193Phosphoserine(IKK)HMM predict
223N-linkedHMM predict
231Phosphoserine(PKG)HMM predict
233Phosphothreonine(MAPK)HMM predict
237O-linkedHMM predict
253Phosphotyrosine(INSR)HMM predict
265Phosphoserine(PKG)HMM predict
268Phosphoserine(MAPK)HMM predict
268Phosphoserine(CDC2)HMM predict
268O-linkedHMM predict
268O-linkedHMM predict
268Phosphoserine(IKK)HMM predict
271O-linkedHMM predict
271Phosphoserine(IKK)HMM predict
272O-linkedHMM predict
273O-linkedHMM predict
280Phosphoserine(IKK)HMM predict
288Phosphoserine(ATM)HMM predict
307Phosphoserine(ATM)HMM predict
337Phosphoserine(ATM)HMM predict
341Phosphoserine(CDC2)HMM predict
361Phosphoserine(CDC2)HMM predict
361O-linkedHMM predict
420N-linkedHMM predict
430Phosphoserine(IKK)HMM predict
463Phosphothreonine(CDK)HMM predict
463Phosphothreonine(MAPK)HMM predict
466Phosphoserine(CDC2)HMM predict
466O-linkedHMM predict
466O-linkedHMM predict
468O-linkedHMM predict
471O-linkedHMM predict
472O-linkedHMM predict
497Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002501
  • Location:chr19 12967583-13070608
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 12959066 12960402 1336 7850
GABP k562GSE8489 12958752 12958970 218 8723
H3ac HepG2E 12962940 12963335 395 4446
Myc K562GSE19551 12956816 12957540 724 10406
SRF GMOGSE8489 12960369 12960552 183 7123
SRF k562GSE8489 12958752 12959039 287 8688
TAF HelaGSE8489 12958752 12959141 389 8637
TAF k562GSE8489 12958752 12959108 356 8654
USF1 HepG2E 12962940 12963480 540 4374
hScc1 BcellGSE12603 12962940 12963407 467 4410
p130 shRbQuiescentGSE19898 12966672 12967105 433 695
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 13005990 13006198 208 0
CTCF CD4GSE12889 13033176 13033505 329 0
CTCF CD4GSE12889 13065649 13065924 275 0
CTCF CD4SISSRdata 13005990 13006198 208 0
CTCF CD4SISSRdata 13033176 13033505 329 0
CTCF CD4SISSRdata 13065649 13065924 275 0
CTCF HelaGSE12889 13065507 13065953 446 0
CTCF JurkatGSE12889 13005967 13006189 222 0
CTCF G2GSE9613 12969542 12969876 334 0
CTCF G2GSE9613 12973535 12974127 592 0
CTCF G2GSE9613 12976058 12976309 251 0
CTCF G2GSE9613 13066587 13066818 231 0
CTCF G2GSE9613 13069553 13070000 447 0
ER Fulvestrant-MCF7GSE14664 13068917 13068951 34 0
FOXA1 MCF7GSE15244 13022759 13024105 1346 0
Fos K562GSE19551 12984977 12985564 587 0
FoxA1 MCF7MACSdata 13023437 13023686 249 0
Gata1 K562GSE18868 13041213 13042273 1060 0
Gata2 K562GSE18868 13040943 13042031 1088 0
H3ac HepG2E 12993756 12994273 517 0
HIF1 HypoHepG2 13025670 13026058 388 0
Myc K562GSE19551 12984918 12985461 543 0
Myc K562GSE19551 13041282 13042069 787 0
Oct1 H2O2-HelaGSE14283 13019106 13019134 28 0
Oct1 HelaGSE14283 13019098 13019137 39 0
Oct1 HelaGSE14283 13065321 13065358 37 0
TFAP2C MCF7GSE21234 12977582 12978069 487 0
TFAP2C MCF7GSE21234 13008032 13008718 686 0
TFAP2C MCF7GSE21234 13023163 13024164 1001 0
TFAP2C MCF7GSE21234 13065571 13066182 611 0
TFAP2C MCF7GSE21234 13066576 13067312 736 0
USF1 HepG2E 13032105 13033289 1184 0
USF2 HepG2E 13032400 13033256 856 0
hScc1 BcellGSE12603 12968373 12968870 497 0
hScc1 BcellGSE12603 12972979 12973289 310 0
hScc1 BcellGSE12603 12974616 12975433 817 0
hScc1 BcellGSE12603 12976058 12976465 407 0
hScc1 BcellGSE12603 12985186 12985605 419 0
hScc1 BcellGSE12603 13001785 13002082 297 0
hScc1 BcellGSE12603 13005911 13006161 250 0
hScc1 BcellGSE12603 13032873 13033544 671 0
hScc1 BcellGSE12603 13059711 13060071 360 0
hScc1 BcellGSE12603 13065448 13066092 644 0
hScc1 BcellGSE12603 13069553 13070268 715 0
hScc1 CdLSGSE12603 13001435 13002082 647 0
p130 SenescentGSE19898 13005941 13006251 310 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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