AutismKB 2.0

Annotation Detail for NFRKB


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:NFRKB ( DKFZp547B2013,INO80G )
Gene Full Name: nuclear factor related to kappaB binding protein
Band: 11q24.3
Quick LinksEntrez ID:4798; OMIM: 164013; Uniprot ID:NFRKB_HUMAN; ENSEMBL ID: ENSG00000170322; HGNC ID: 7802
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
176Phosphoserine.
178Phosphoserine.
226Phosphoserine.
228Phosphoserine.
298Phosphoserine.
351Phosphoserine.
376Phosphoserine.
799Phosphoserine.
803Phosphoserine.
1035Phosphothreonine.
1199Phosphoserine.
1202Phosphothreonine.
1237N6-acetyllysine.
1291Phosphoserine.
Location(AA) Modifications Resource
176Phosphoserine.Swiss-Prot 53.0
176PhosphoserinePhospho.ELM 6.0
226PhosphoserinePhospho.ELM 6.0
228PhosphoserinePhospho.ELM 6.0
351Phosphoserine.Swiss-Prot 53.0
351PhosphoserinePhospho.ELM 6.0
376Phosphoserine.Swiss-Prot 53.0
Location(AA) Modification Resource
37Phosphoserine(PKG)HMM predict
63Phosphoserine(CK1)HMM predict
65Phosphoserine(ATM)HMM predict
176Phosphoserine(CDC2)HMM predict
176Phosphoserine(CDK)HMM predict
178O-linkedHMM predict
180Phosphothreonine(CDC2)HMM predict
180Phosphothreonine(MAPK)HMM predict
180Phosphothreonine(CDK)HMM predict
188Phosphothreonine(PKC)HMM predict
209Phosphoserine(CK2)HMM predict
210Phosphoserine(CK2)HMM predict
222Phosphoserine(CDC2)HMM predict
222Phosphoserine(CDK)HMM predict
226O-linkedHMM predict
226Phosphoserine(CDC2)HMM predict
226Phosphoserine(CDK)HMM predict
226PhosphoserineHMM predict
228O-linkedHMM predict
228Phosphoserine(CDC2)HMM predict
298Phosphoserine(PKA)HMM predict
298Phosphoserine(CAMK2)HMM predict
325Phosphothreonine(PKC)HMM predict
339O-linkedHMM predict
339Phosphoserine(CK1)HMM predict
347O-linkedHMM predict
347Phosphoserine(ATM)HMM predict
351Phosphoserine(CDC2)HMM predict
391Phosphoserine(ATM)HMM predict
408Phosphoserine(CDC2)HMM predict
411Phosphoserine(IKK)HMM predict
412Phosphoserine(CK1)HMM predict
446Phosphoserine(CDC2)HMM predict
464Phosphoserine(ATM)HMM predict
494Phosphoserine(CK1)HMM predict
499Phosphothreonine(CDC2)HMM predict
514Phosphothreonine(PKC)HMM predict
530Phosphoserine(ATM)HMM predict
567Phosphoserine(CK1)HMM predict
567Phosphoserine(IKK)HMM predict
688Phosphoserine(CDC2)HMM predict
689Phosphoserine(PKG)HMM predict
690Phosphoserine(CK1)HMM predict
709Phosphoserine(CK1)HMM predict
709Phosphoserine(IKK)HMM predict
711Phosphoserine(ATM)HMM predict
721Phosphothreonine(CDK)HMM predict
724Phosphothreonine(MAPK)HMM predict
726O-linkedHMM predict
736O-linkedHMM predict
736Phosphoserine(CDC2)HMM predict
741O-linkedHMM predict
744N-linkedHMM predict
746Phosphoserine(IKK)HMM predict
749O-linkedHMM predict
750Phosphothreonine(PKC)HMM predict
757Phosphoserine(CK1)HMM predict
766Phosphoserine(CDC2)HMM predict
777Phosphoserine(CDC2)HMM predict
780O-linkedHMM predict
781Phosphoserine(ATM)HMM predict
783O-linkedHMM predict
783O-linkedHMM predict
786Phosphoserine(CK2)HMM predict
787Phosphoserine(ATM)HMM predict
795O-linkedHMM predict
812O-linkedHMM predict
820O-linkedHMM predict
851Phosphothreonine(PKC)HMM predict
855O-linkedHMM predict
862O-linkedHMM predict
862Phosphothreonine(PKC)HMM predict
878O-linkedHMM predict
880O-linkedHMM predict
881O-linkedHMM predict
881O-linkedHMM predict
885O-linkedHMM predict
887Phosphoserine(CDC2)HMM predict
887Phosphoserine(MAPK)HMM predict
887Phosphoserine(CDK)HMM predict
887Phosphoserine(IKK)HMM predict
890O-linkedHMM predict
890O-linkedHMM predict
890Phosphoserine(IKK)HMM predict
894O-linkedHMM predict
895O-linkedHMM predict
896O-linkedHMM predict
896Phosphoserine(CDC2)HMM predict
896Phosphoserine(IKK)HMM predict
899O-linkedHMM predict
900O-linkedHMM predict
903O-linkedHMM predict
905O-linkedHMM predict
905O-linkedHMM predict
912N-linkedHMM predict
917N-linkedHMM predict
962O-linkedHMM predict
1000N-linkedHMM predict
1014O-linkedHMM predict
1027Phosphoserine(PKG)HMM predict
1030O-linkedHMM predict
1030O-linkedHMM predict
1030Phosphoserine(IKK)HMM predict
1033O-linkedHMM predict
1033O-linkedHMM predict
1034O-linkedHMM predict
1035O-linkedHMM predict
1035Phosphothreonine(MAPK)HMM predict
1037O-linkedHMM predict
1039O-linkedHMM predict
1045O-linkedHMM predict
1051O-linkedHMM predict
1051O-linkedHMM predict
1076Phosphothreonine(PKC)HMM predict
1079O-linkedHMM predict
1087Phosphothreonine(PKC)HMM predict
1121O-linkedHMM predict
1121O-linkedHMM predict
1126O-linkedHMM predict
1130Phosphoserine(IKK)HMM predict
1146O-linkedHMM predict
1146O-linkedHMM predict
1154O-linkedHMM predict
1154O-linkedHMM predict
1156O-linkedHMM predict
1157O-linkedHMM predict
1161Phosphothreonine(PKC)HMM predict
1168O-linkedHMM predict
1173O-linkedHMM predict
1173O-linkedHMM predict
1185Phosphothreonine(PKA)HMM predict
1263Phosphothreonine(PKC)HMM predict
1278O-linkedHMM predict
1282O-linkedHMM predict
1282O-linkedHMM predict
1287O-linkedHMM predict
1287O-linkedHMM predict
1291O-linkedHMM predict
1291Phosphoserine(CDC2)HMM predict
1296ProlineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006165
  • Location:chr11 129239574-129268113
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 129270662 129271003 341 2719
CTCF CD4SISSRdata 129270662 129271003 341 2719
H3K4me3 colorectalcancer 129269352 129270324 972 1725
H3ac HepG2E 129268980 129270287 1307 1520
NRSF pAbJurkat 129270389 129270777 388 2470
PHF8 293TGSE20725 129270049 129271429 1380 2626
PHF8 HeLaGSE20725 129270096 129271257 1161 2563
PHF8 Hs68minusFBSGSE20725 129270030 129271438 1408 2621
Rb SenescentGSE19898 129270818 129271017 199 2804
hScc1 BcellGSE12603 129270287 129270777 490 2419
p130 QuiescentGSE19898 129270793 129271062 269 2814
p130 QuiescentGSE19898 129271068 129271239 171 3040
p130 shRbSenescentGSE19898 129270867 129271176 309 2908
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
RARA MCF7GSE15244 129240986 129242367 1381 0
RARG MCF7GSE15244 129241287 129242008 721 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved