Annotation Detail for NFYA
Basic Information Top
| Gene Symbol: | NFYA ( CBF-A,CBF-B,FLJ11236,HAP2,NF-YA ) |
|---|---|
| Gene Full Name: | nuclear transcription factor Y, alpha |
| Band: | 6p21.1 |
| Quick Links | Entrez ID:4800; OMIM: 189903; Uniprot ID:NFYA_HUMAN; ENSEMBL ID: ENSG00000001167; HGNC ID: 7804 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 282 | Subunit association domain (SAD). | |
| 326 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 9 | N-linked | HMM predict |
| 10 | Phosphoserine(CK1) | HMM predict |
| 11 | Phosphoserine(CK1) | HMM predict |
| 142 | O-linked | HMM predict |
| 142 | O-linked | HMM predict |
| 188 | O-linked | HMM predict |
| 210 | O-linked | HMM predict |
| 211 | N-linked | HMM predict |
| 212 | O-linked | HMM predict |
| 212 | O-linked | HMM predict |
| 215 | O-linked | HMM predict |
| 219 | O-linked | HMM predict |
| 221 | O-linked | HMM predict |
| 266 | Phosphotyrosine(INSR) | HMM predict |
| 266 | Phosphotyrosine(SRC) | HMM predict |
| 298 | Phosphotyrosine(Jak) | HMM predict |
| 320 | Phosphoserine(CDC2) | HMM predict |
- RefSeq ID: NM_002505
- Location:chr6 41148687-41174712
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| HIF1 | Norm | HepG2 | 41148009 | 41148877 | 868 | 245 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| p63 | keratinocytes | GSE17611 | 41186526 | 41187432 | 906 | 12267 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 41148669 | 41149472 | 803 | 0 |
| FoxA1 | MCF7 | MACSdata | 41158886 | 41159048 | 162 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 41149790 | 41150389 | 599 | 0 |
| H3K4me3 | colorectal | cancer | 41149767 | 41150417 | 650 | 0 |
| H3ac | HepG2 | E | 41149555 | 41151408 | 1853 | 0 |
| Oct1 | Hela | GSE14283 | 41168831 | 41168877 | 46 | 0 |
| PHF8 | 293T | GSE20725 | 41147403 | 41150068 | 2665 | 0 |
| PHF8 | HeLa | GSE20725 | 41147184 | 41150488 | 3304 | 0 |
| PHF8 | Hs68minusFBS | GSE20725 | 41148746 | 41149289 | 543 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 41148463 | 41150019 | 1556 | 0 |
| TAF | Hela | GSE8489 | 41149590 | 41150773 | 1183 | 0 |
| TAF | k562 | GSE8489 | 41149590 | 41151665 | 2075 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22578 | mRNA | NFYA | chr6 | 41148687 | 41174714 | 75 | EST | chr6 | 41144585 | 41173504 | Sense/Antisense (SA) pairs | |