Annotation Detail for NHP2L1

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Basic Information Top

Gene Symbol:	NHP2L1 ( 15.5K,FA-1,FA1,NHPX,OTK27,SNRNP15-5,SNU13,SPAG12,SSFA1 )
Gene Full Name:	NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
Band:	22q13
Quick Links	Entrez ID:4809; OMIM: 601304; Uniprot ID:NH2L1_HUMAN; ENSEMBL ID: ENSG00000100138; HGNC ID:
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:1 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
2	N-acetylthreonine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_001003796
Location:chr22 40399883-40414858
strand:-

Upstream the gene:5 results
Downstream the gene:0 results
Inside the gene:13 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Rb	Senescent	GSE19898	40414640	40415111	471	17
TAFII	hES	GSE17917	40414691	40415086	395	30
p130	Quiescent	GSE19898	40414687	40415066	379	18
p130	Senescent	GSE19898	40414642	40415115	473	20
p130	shRbQuiescent	GSE19898	40414612	40415117	505	6

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ETS1	Jurkat	GSE17954	40413745	40415344	1599	0
FOXA1	MCF7	GSE15244	40413616	40413989	373	0
H3K4me2	HCT116	GSE10453	40413413	40414159	746	0
H3K4me3	colorectal	cancer	40413544	40414235	691	0
H3ac	HepG2	E	40413309	40414588	1279	0
NFkBII	GM15510	GSE19485	40414219	40415330	1111	0
PHF8	HeLa	GSE20725	40414058	40415479	1421	0
PHF8	Hs68minusFBS	GSE20725	40414311	40415275	964	0
Rb	Quiescent	GSE19898	40414664	40415002	338	0
p130	Senescent	GSE19898	40413898	40414635	737	0
p130	shRbQuiescent	GSE19898	40413825	40414498	673	0
p130	shRbSenescent	GSE19898	40413901	40414357	456	0
p130	shRbSenescent	GSE19898	40414599	40415072	473	0

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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